RPSBLAST alignment of GI: 254780288 and SCOP domain: d2f1na1

Alignment

 Score =  120 bits (301), Expect = 1e-28
 Identities = 36/291 (12%), Positives = 65/291 (22%), Gaps = 74/291 (25%)

Query: 1   MSVVTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           ++   VATWN+    A   +            EN  DI+ +QE  +             +
Sbjct: 2   LTDFRVATWNLQGASATTESKWNINVRQLISGENAVDILAVQEAGSPPSTAVDTGRVIPS 61

Query: 55  -----------------------YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQ 91
                                  Y            +A++S  +  E+    P       
Sbjct: 62  PGIPVRELIWNLSTNSRPQQVYIYFSAVDALGGRVNLALVSNRRADEVFVLSPVRQGGRP 121

Query: 92  ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
                    I          +        +      +  +  F R +   +      +  
Sbjct: 122 L------LGIRIGNDAFFTAHAIAMRNNDAPAL---VEEVYNFFRDSRDPVHQALNWMIL 172

Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211
           GD+N  P                         +    +    A                 
Sbjct: 173 GDFNREP----------------------ADLEMNLTVPVRRASEIISPA---------- 200

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLH--SARIDTKPRGWTKPSDHTPVIVS 260
             + ++     +D+ +             A I    R     SDH PV VS
Sbjct: 201 --AATQTSQRTLDYAVAGNSVAFRPSPLQAGIVYGARRTQISSDHFPVGVS 249

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Cytolethal distending toxin subunit B
species: Escherichia coli [TaxId: 562]