HHsearch alignment for GI: 254780289 and conserved domain: COG3413

>COG3413 Predicted DNA binding protein [General function prediction only].
Probab=94.82  E-value=0.11  Score=32.13  Aligned_cols=51  Identities=25%  Similarity=0.449  Sum_probs=41.7

Q ss_pred             HCCCHHHHHHHHHHHCCC---CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf             329988999999981879---867468899989966789999999999999832
Q gi|254780289|r  618 ASLTPREERVLRMRFGIG---MNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLK  668 (682)
Q Consensus       618 ~~l~~re~~v~~~r~g~~---~~~~~tl~e~~~~~~~~~er~rqi~~~a~~~l~  668 (682)
T Consensus       154 ~~LTdrQ~~vL~~A~~~GYFd~PR~~~l~dLA~~lGISkst~~ehLRrAe~Kl~  207 (215)
T COG3413         154 NDLTDRQLEVLRLAYKMGYFDYPRRVSLKDLAKELGISKSTLSEHLRRAERKLI  207 (215)
T ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             469999999999999858988876589999999959988899999999999999