HHsearch alignment for GI: 254780289 and conserved domain: PRK09390
>PRK09390 fixJ response regulator FixJ; Provisional.
Probab=94.98 E-value=0.19 Score=30.47 Aligned_cols=59 Identities=19% Similarity=0.253 Sum_probs=49.9
Q ss_pred HHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 9997329988999999981879867468899989966789999999999999832967778756
Q gi|254780289|r 614 TRVLASLTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKHPSRSKKLR 677 (682)
Q Consensus 614 ~~~l~~l~~re~~v~~~r~g~~~~~~~tl~e~~~~~~~~~er~rqi~~~a~~~l~~~~~~~~l~ 677 (682)
T Consensus 136 ~~~~~~LT~RE~eVL~ll-----~~G~snkeIA~~L~iS~~TV~~h~~~I~~KL~v~~~~elv~ 194 (202)
T PRK09390 136 RARIASLSERERQVMDGL-----VAGLSNKVIARDLDISPRTVEVYRANVMTKMQAGSLSELVR 194 (202)
T ss_pred HHHHCCCCHHHHHHHHHH-----HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 740066998999999999-----83896899999979878899999999999968898899999