HHsearch alignment for GI: 254780289 and conserved domain: PRK10360
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional.
Probab=95.84 E-value=0.045 Score=35.35 Aligned_cols=60 Identities=20% Similarity=0.312 Sum_probs=54.1
Q ss_pred HCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf 32998899999998187986746889998996678999999999999983296777875665179
Q gi|254780289|r 618 ASLTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKHPSRSKKLRSFLDG 682 (682)
Q Consensus 618 ~~l~~re~~v~~~r~g~~~~~~~tl~e~~~~~~~~~er~rqi~~~a~~~l~~~~~~~~l~~~~~~ 682 (682)
T Consensus 136 ~~LT~RE~eVL~li-----a~G~snkeIA~~L~IS~~TVk~h~~~i~~KL~v~~r~el~r~a~~~ 195 (196)
T PRK10360 136 DPLTKRERQVAEKL-----AQGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 (196)
T ss_pred CCCCHHHHHHHHHH-----HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
T ss_conf 89997999999999-----8799999999996999999999999999981999999999999706