HHsearch alignment for GI: 254780289 and conserved domain: PRK10840
>PRK10840 transcriptional regulator RcsB; Provisional.
Probab=94.93 E-value=0.12 Score=32.05 Aligned_cols=54 Identities=24% Similarity=0.323 Sum_probs=47.7
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 29988999999981879867468899989966789999999999999832967778756
Q gi|254780289|r 619 SLTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKHPSRSKKLR 677 (682)
Q Consensus 619 ~l~~re~~v~~~r~g~~~~~~~tl~e~~~~~~~~~er~rqi~~~a~~~l~~~~~~~~l~ 677 (682)
T Consensus 150 ~LT~RE~eVL~ll-----a~G~snkeIA~~L~iS~~TV~~h~~~i~~KLgv~n~~eLv~ 203 (216)
T PRK10840 150 RLSPKESEVLRLF-----AEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLN 203 (216)
T ss_pred CCCHHHHHHHHHH-----HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 9998999999999-----86999999998969899999999999999829998999999