HHsearch alignment for GI: 254780289 and conserved domain: PRK10840

>PRK10840 transcriptional regulator RcsB; Provisional.
Probab=94.93  E-value=0.12  Score=32.05  Aligned_cols=54  Identities=24%  Similarity=0.323  Sum_probs=47.7

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             29988999999981879867468899989966789999999999999832967778756
Q gi|254780289|r  619 SLTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKHPSRSKKLR  677 (682)
Q Consensus       619 ~l~~re~~v~~~r~g~~~~~~~tl~e~~~~~~~~~er~rqi~~~a~~~l~~~~~~~~l~  677 (682)
T Consensus       150 ~LT~RE~eVL~ll-----a~G~snkeIA~~L~iS~~TV~~h~~~i~~KLgv~n~~eLv~  203 (216)
T PRK10840        150 RLSPKESEVLRLF-----AEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLN  203 (216)
T ss_pred             CCCHHHHHHHHHH-----HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf             9998999999999-----86999999998969899999999999999829998999999