HHsearch alignment for GI: 254780289 and conserved domain: PRK13870
>PRK13870 transcriptional regulator TraR; Provisional.
Probab=94.10 E-value=0.53 Score=26.86 Aligned_cols=51 Identities=24% Similarity=0.318 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 99889999999818798674688999899667899999999999998329677787
Q gi|254780289|r 620 LTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKHPSRSKK 675 (682)
Q Consensus 620 l~~re~~v~~~r~g~~~~~~~tl~e~~~~~~~~~er~rqi~~~a~~~l~~~~~~~~ 675 (682)
T Consensus 174 LT~RE~E~L~W~-----A~GKT~~EIA~ILgISe~TV~fHl~na~~KL~a~nr~qA 224 (234)
T PRK13870 174 LDPKEATYLRWI-----AVGMTMEEIADVEGVKYNSVRVKLREAMKRFDVRSKAHL 224 (234)
T ss_pred CCHHHHHHHHHH-----HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 997999999999-----789989999999798899999999999999589989999