HHsearch alignment for GI: 254780289 and conserved domain: PRK13870

>PRK13870 transcriptional regulator TraR; Provisional.
Probab=94.10  E-value=0.53  Score=26.86  Aligned_cols=51  Identities=24%  Similarity=0.318  Sum_probs=45.7

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             99889999999818798674688999899667899999999999998329677787
Q gi|254780289|r  620 LTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKHPSRSKK  675 (682)
Q Consensus       620 l~~re~~v~~~r~g~~~~~~~tl~e~~~~~~~~~er~rqi~~~a~~~l~~~~~~~~  675 (682)
T Consensus       174 LT~RE~E~L~W~-----A~GKT~~EIA~ILgISe~TV~fHl~na~~KL~a~nr~qA  224 (234)
T PRK13870        174 LDPKEATYLRWI-----AVGMTMEEIADVEGVKYNSVRVKLREAMKRFDVRSKAHL  224 (234)
T ss_pred             CCHHHHHHHHHH-----HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf             997999999999-----789989999999798899999999999999589989999