RPSBLAST alignment for GI: 254780289 and conserved domain: TIGR02835

>gnl|CDD|131882 TIGR02835, spore_sigmaE, RNA polymerase sigma-E factor. Members of this family comprise the Firmicutes lineage endospore formation-specific sigma factor SigE, also called SpoIIGB and sigma-29. As characterized in Bacillus subtilis, this protein is synthesized as a precursor, specifically in the mother cell compartment, and must cleaved by the SpoIIGA protein to be made active. Length = 234
 Score = 64.8 bits (158), Expect = 7e-11
 Identities = 58/247 (23%), Positives = 115/247 (46%), Gaps = 53/247 (21%)

Query: 422 ISISEFRHIVSMVRKGECEASIAKKEMVEANLRLVISVAKKYTNRGLQFLDLIQEGNIGL 481
           ++  E   ++  + +G+  A   K  ++E NLRLV+ +A+K+ N G+   DL+  G IGL
Sbjct: 34  LTGEEEEALLQKLTQGDESA---KSTLIERNLRLVVYIARKFENTGIGIEDLVSIGTIGL 90

Query: 482 MKAAEKFDWCLGYKFSTYAMWWVKQAITRSIADQSCTIRIPVHMRDKIHKVVRTARRMSN 541
           +KA   F+     K +TYA        +R I ++     I +++            R +N
Sbjct: 91  IKAVNTFNPSKKIKLATYA--------SRCIENE-----ILMYL------------RRNN 125

Query: 542 KIKREPTPEEIAKKLAMPVEGVRKVLKITKEPISLETPIGDEDTSHLGDFIEDKNAVSPL 601
           K + E + +E    L +  +G   +L          + +   D+  +  ++E++      
Sbjct: 126 KTRSEVSFDE---PLNVDWDGNELLL----------SDVLGTDSDIVYKYLEEEVD---- 168

Query: 602 DSAIQANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEA 661
                   RE   + LA L  RE++++ +RFG+   T+ T +EV     +++  I ++E 
Sbjct: 169 --------RELLRKALAKLNDREKKIMELRFGLVGGTEKTQKEVADMLGISQSYISRLEK 220

Query: 662 KAIRKLK 668
           + +++LK
Sbjct: 221 RILKRLK 227