RPSBLAST alignment for GI: 254780289 and conserved domain: PRK07122
>gnl|CDD|168831 PRK07122, PRK07122, RNA polymerase sigma factor SigF; Reviewed. Length = 264
Score = 82.5 bits (204), Expect = 3e-16
Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 21/257 (8%)
Query: 423 SISEFRHIVSMVRK------GECEASIAKKEMVEANLRLVISVAKKYTNRGLQFLDLIQE 476
S E+ + M R+ G E + +V L L +A+++ RG DL+Q
Sbjct: 14 STDEYADVPEMFRELAGLPAGSPEFQRQRDRIVTRCLPLADHIARRFDGRGEPRDDLVQV 73
Query: 477 GNIGLMKAAEKFDWCLGYKFSTYAMWWVKQAITRSIADQSCTIRIPVHMRDKIHKVVRTA 536
+GL+ A +FD G F ++A+ + + R D S ++++P +++ ++ R
Sbjct: 74 ARVGLVNAVNRFDVETGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRLKELHLRLGRAT 133
Query: 537 RRMSNKIKREPTPEEIAKKLAMPVEGVRKVLKI--TKEPISLETPIG--DEDTSHLGDFI 592
+S ++ R PT E+A +L M E V + L +S+++ G D+D + D +
Sbjct: 134 AELSQRLGRAPTASELAAELGMDREEVVEGLVAGSAYNTLSIDSGGGSGDDDARAIADTL 193
Query: 593 EDKNAVSPLDSAI-QANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGKQFCV 651
D +D+ + Q RE +LA+L RE VL +RF M E VG +
Sbjct: 194 GD------VDAGLDQIENREALRPLLAALPERERTVLVLRFFESMTQTQIAERVG----I 243
Query: 652 TRERIRQIEAKAIRKLK 668
++ + ++ AK + +L+
Sbjct: 244 SQMHVSRLLAKTLARLR 260