RPSBLAST alignment for GI: 254780289 and conserved domain: PRK05657
>gnl|CDD|180185 PRK05657, PRK05657, RNA polymerase sigma factor RpoS; Validated. Length = 325
Score = 220 bits (564), Expect = 6e-58
Identities = 96/251 (38%), Positives = 158/251 (62%), Gaps = 5/251 (1%)
Query: 429 HIVSMVRKGECEASIAKKEMVEANLRLVISVAKKYTNRGLQFLDLIQEGNIGLMKAAEKF 488
+ +G+ A ++ M+E+NLRLV+ +AK+Y NRGL LDLI+EGN+GL++A EKF
Sbjct: 75 YFARRALRGDFAA---RQRMIESNLRLVVKIAKRYLNRGLALLDLIEEGNLGLIRAVEKF 131
Query: 489 DWCLGYKFSTYAMWWVKQAITRSIADQSCTIRIPVHMRDKIHKVVRTARRMSNKIKREPT 548
D G++FSTYA WW++Q I R+I +Q+ TIR+PVH+ +++ +R AR + +K+ EP+
Sbjct: 132 DPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPVHVVKELNVYLRAARELEHKLDHEPS 191
Query: 549 PEEIAKKLAMPVEGVRKVLKITKEPISLETPIGDEDTSHLGDFIEDKNAVSPLDSAIQAN 608
EEIA+ L PV+ V ++L + + SL+TP+G + L D + D+ P + Q +
Sbjct: 192 AEEIAELLDKPVDDVSRMLALNERITSLDTPLGGDPEKSLLDILADEQENGP-EDTTQDD 250
Query: 609 LRETTTRV-LASLTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKL 667
+ + L L ++ VL RFG+ TLE+V ++ +TRER+RQI+ +A+R+L
Sbjct: 251 DMKQSIVKWLFELNDKQREVLARRFGLLGYEAATLEDVAREIGLTRERVRQIQVEALRRL 310
Query: 668 KHPSRSKKLRS 678
+ +++ L
Sbjct: 311 REILQTQGLSI 321