RPSBLAST alignment for GI: 254780289 and conserved domain: PRK07598

>gnl|CDD|181056 PRK07598, PRK07598, RNA polymerase sigma factor SigC; Validated. Length = 415
 Score =  251 bits (642), Expect = 5e-67
 Identities = 113/238 (47%), Positives = 169/238 (71%), Gaps = 1/238 (0%)

Query: 444 AKKEMVEANLRLVISVAKKYTNRGLQFLDLIQEGNIGLMKAAEKFDWCLGYKFSTYAMWW 503
           AK+ M++ANLRLV+SVAKKY NRGL+ LDL+QEG +GL +A EKFD   GY+FSTYA WW
Sbjct: 176 AKEHMIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWW 235

Query: 504 VKQAITRSIADQSCTIRIPVHMRDKIHKVVRTARRMSNKIKREPTPEEIAKKLAMPVEGV 563
           ++Q ITR+IA QS TIR+PVH+ +K++K+ +  R++S +  R PT E+IA++L M    V
Sbjct: 236 IRQGITRAIATQSRTIRLPVHITEKLNKIKKAQRKISQEKGRTPTIEDIAQELEMTPTQV 295

Query: 564 RKVLKITKEPISLETPIGDEDTSHLGDFIEDKNAVSPLDSAIQANLRETTTRVLASLTPR 623
           R+VL      +SLET +G +  + LGD +E  + +SP +  ++ +L+     +LA LT R
Sbjct: 296 REVLLRVPRSVSLETKVGKDKDTELGDLLE-TDDISPEEMLMRESLQRDLQHLLADLTSR 354

Query: 624 EERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKHPSRSKKLRSFLD 681
           E  V+RMRFG+     ++L E+G+   ++RER+RQIE+KA++KL+ P R  ++R +L+
Sbjct: 355 ERDVIRMRFGLADGHTYSLAEIGRALDLSRERVRQIESKALQKLRQPKRRNRIRDYLE 412