RPSBLAST alignment for GI: 254780289 and conserved domain: PRK08583
>gnl|CDD|181489 PRK08583, PRK08583, RNA polymerase sigma factor SigB; Validated. Length = 257
Score = 60.9 bits (148), Expect = 1e-09
Identities = 58/236 (24%), Positives = 116/236 (49%), Gaps = 26/236 (11%)
Query: 444 AKKEMVEANLRLVISVAKKYTNRGLQFLDLIQEGNIGLMKAAEKFDWCLGYKFSTYAMWW 503
A++++V+ LV S+A KY+ DL+Q G +GL+ A ++D G F +A+
Sbjct: 30 AQEKLVKHYKNLVESLAYKYSKGQSHHEDLVQVGMVGLLGAIRRYDPSFGRSFEAFAVPT 89
Query: 504 VKQAITRSIADQSCTIRIPVHMRDKIHKVVRTARRMSNKIKREPTPEEIAKKLAMPVEGV 563
+ I R + D++ ++ +P +++ K+ + ++ +++R P EIA +L + E V
Sbjct: 90 IIGEIKRYLRDKTWSVHVPRRIKELGPKIKKAVDELTTELQRSPKISEIADRLGVSEEEV 149
Query: 564 RKVLKITK--EPISLETPI-GDEDTSHLGDFIEDKNAVSPLDSAIQ-------ANLRETT 613
+ +++ K + +S++ I D D S V+ LD Q R
Sbjct: 150 LEAMEMGKSYQALSVDHSIEADSDGS----------TVTLLDIVGQQEDGYELTEQRMIL 199
Query: 614 TRVLASLTPREERVLRMRFGIGMNTDHTLEEVG-KQFCVTRERIRQIEAKAIRKLK 668
++L L+ RE+ +++ F ++ T E +G Q V+R ++ +AI+KL+
Sbjct: 200 EKILPVLSDREKSIIQCTFIENLSQKETGERLGISQMHVSR-----LQRQAIKKLR 250