RPSBLAST alignment for GI: 254780289 and conserved domain: PRK08583

>gnl|CDD|181489 PRK08583, PRK08583, RNA polymerase sigma factor SigB; Validated. Length = 257
 Score = 60.9 bits (148), Expect = 1e-09
 Identities = 58/236 (24%), Positives = 116/236 (49%), Gaps = 26/236 (11%)

Query: 444 AKKEMVEANLRLVISVAKKYTNRGLQFLDLIQEGNIGLMKAAEKFDWCLGYKFSTYAMWW 503
           A++++V+    LV S+A KY+       DL+Q G +GL+ A  ++D   G  F  +A+  
Sbjct: 30  AQEKLVKHYKNLVESLAYKYSKGQSHHEDLVQVGMVGLLGAIRRYDPSFGRSFEAFAVPT 89

Query: 504 VKQAITRSIADQSCTIRIPVHMRDKIHKVVRTARRMSNKIKREPTPEEIAKKLAMPVEGV 563
           +   I R + D++ ++ +P  +++   K+ +    ++ +++R P   EIA +L +  E V
Sbjct: 90  IIGEIKRYLRDKTWSVHVPRRIKELGPKIKKAVDELTTELQRSPKISEIADRLGVSEEEV 149

Query: 564 RKVLKITK--EPISLETPI-GDEDTSHLGDFIEDKNAVSPLDSAIQ-------ANLRETT 613
            + +++ K  + +S++  I  D D S           V+ LD   Q          R   
Sbjct: 150 LEAMEMGKSYQALSVDHSIEADSDGS----------TVTLLDIVGQQEDGYELTEQRMIL 199

Query: 614 TRVLASLTPREERVLRMRFGIGMNTDHTLEEVG-KQFCVTRERIRQIEAKAIRKLK 668
            ++L  L+ RE+ +++  F   ++   T E +G  Q  V+R     ++ +AI+KL+
Sbjct: 200 EKILPVLSDREKSIIQCTFIENLSQKETGERLGISQMHVSR-----LQRQAIKKLR 250