HHsearch alignment for GI: 254780290 and conserved domain: COG2518
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones].
Probab=96.38 E-value=0.00055 Score=45.49 Aligned_cols=110 Identities=24% Similarity=0.272 Sum_probs=72.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCC
Q ss_conf 2222233322211122222222222211344444322222122222222111223221111----112233222222222
Q gi|254780290|r 125 SLPESFFTVWANLFQTANLRSGQTVLIHGGSSGIGTTAIQLASYFGATVYTTAKSEEKCLA----CLKLGAKHAINYLKE 200 (332)
Q Consensus 125 ~l~~~~~tA~~~l~~~~~~~~g~~vlV~ga~g~vG~~a~qla~~~G~~vi~~~~~~~~~~~----~~~lGa~~vi~~~~~ 200 (332)
T Consensus 54 tis~P~~vA~--m~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV-~v~~g 127 (209)
T COG2518 54 TISAPHMVAR--MLQLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENV-TVRHG 127 (209)
T ss_pred EECCCHHHHH--HHHHHCCCCCCEEEEEC--CCCHHHHHHHHHHHC-EEEEEEECHHHHHHHHHHHHHCCCCCE-EEEEC
T ss_conf 5057479999--99974899998688877--783099999999748-499999719999999999997698734-99978
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCEEE
Q ss_conf 111122222222211122221111112-2222112234530479
Q gi|254780290|r 201 DFLEILQKETQGRGIDIILDMVGAEYL-NQHLTLLSKEGKLIII 243 (332)
Q Consensus 201 ~~~~~i~~~t~g~g~Divid~~G~~~~-~~~~~~l~~~G~iv~~ 243 (332)
T Consensus 128 DG~~G~---~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 128 DGSKGW---PEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred CCCCCC---CCCCCCCEEEEEECCCCCCHHHHHHCCCCCEEEEE
T ss_conf 855688---77798478999503577998999850659889999