HHsearch alignment for GI: 254780290 and conserved domain: PRK00258
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed.
Probab=92.05 E-value=0.023 Score=34.80 Aligned_cols=99 Identities=17% Similarity=0.177 Sum_probs=55.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCC
Q ss_conf 111222222222222113444443222221222222-22111223221111-11223322-2222222111122222222
Q gi|254780290|r 136 NLFQTANLRSGQTVLIHGGSSGIGTTAIQLASYFGA-TVYTTAKSEEKCLA-CLKLGAKH-AINYLKEDFLEILQKETQG 212 (332)
Q Consensus 136 ~l~~~~~~~~g~~vlV~ga~g~vG~~a~qla~~~G~-~vi~~~~~~~~~~~-~~~lGa~~-vi~~~~~~~~~~i~~~t~g 212 (332)
T Consensus 112 ~l~~~~~~~~~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~a~~l~~~~~~~~~~~~~~------~~~~~--~ 182 (275)
T PRK00258 112 DLERLGLDLKGKRILLLG-AGGAARAVILPLLELGVAEITIVNRTVERAEELAELFGEGVQALGLD------ELAGE--L 182 (275)
T ss_pred HHHHHCCCCCCCEEEEEC-CCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEHH------HHHHC--C
T ss_conf 999848785687599988-87107999999997699989999589999999999835676275378------75430--4
Q ss_pred CCCCCCCCCCCCCC----CCCCCCCCCCCCCCEEE
Q ss_conf 21112222111111----22222112234530479
Q gi|254780290|r 213 RGIDIILDMVGAEY----LNQHLTLLSKEGKLIII 243 (332)
Q Consensus 213 ~g~Divid~~G~~~----~~~~~~~l~~~G~iv~~ 243 (332)
T Consensus 183 ~~~diiInaTp~Gm~~~~~~~~~~~~~~~~~v~D~ 217 (275)
T PRK00258 183 ADFDLIINTTSAGMSGELPPLPASLLRPGTVVYDM 217 (275)
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHCCCCCEEEEE
T ss_conf 45777996577777788651138764888669986