HHsearch alignment for GI: 254780290 and conserved domain: PRK06484
>PRK06484 short chain dehydrogenase; Validated.
Probab=96.30 E-value=0.00029 Score=47.28 Aligned_cols=181 Identities=18% Similarity=0.208 Sum_probs=92.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCC---CCCCCC----CCCCCCCCCCCCCC
Q ss_conf 22222221134444432222212222222211122322111-11122332222---222221----11122222222211
Q gi|254780290|r 144 RSGQTVLIHGGSSGIGTTAIQLASYFGATVYTTAKSEEKCL-ACLKLGAKHAI---NYLKED----FLEILQKETQGRGI 215 (332)
Q Consensus 144 ~~g~~vlV~ga~g~vG~~a~qla~~~G~~vi~~~~~~~~~~-~~~~lGa~~vi---~~~~~~----~~~~i~~~t~g~g~ 215 (332)
T Consensus 272 ~kGKvalVTGaa~GIG~aiA~~la~~GA~Vvi~d~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~v~~~~~~f-G-~i 349 (530)
T PRK06484 272 RAGRVVCVTGGASGIGAAIADRFAALGDRVAIIDSDGEEAVKLREILGGEHLSWQVDITDEASVESAFAGIQGRL-G-PL 349 (530)
T ss_pred CCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHC-C-CC
T ss_conf 789899992876789999999999887989999588899999999739973699953899999999999999982-9-98
Q ss_pred CCCCCCCCC-C----CCC----------------------CCCCCC-CCCCCCEEEEECCCCCCCCCC------------
Q ss_conf 122221111-1----122----------------------222112-234530479833787543222------------
Q gi|254780290|r 216 DIILDMVGA-E----YLN----------------------QHLTLL-SKEGKLIIISFLGGNIATEIN------------ 255 (332)
Q Consensus 216 Divid~~G~-~----~~~----------------------~~~~~l-~~~G~iv~~G~~~~~~~~~~~------------ 255 (332)
T Consensus 350 DiLVNNAGi~~~~~~~~e~t~e~w~~v~~vNl~g~f~~~~~~~~~m~~~gG~IVnisS~~~~~~~~~~~~Y~asKaav~~ 429 (530)
T PRK06484 350 DVLVNNAGIAEPFAPSAEQSLEDFRRTIDVNLKGAFHCSREAARQMGAGGGVIVNLGSITSLLALPPRHAYGASKAAITM 429 (530)
T ss_pred CEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 89998977898999800099999999999971999999999999731489769997164436588995799999999999
Q ss_pred -----CCHHHCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHC---CCCCCE
Q ss_conf -----433430532167775124000113789999999999999869831021247418999999999982---998132
Q gi|254780290|r 256 -----LNPIISKRITITGSTLRRRTDIAKQSIRDSLQLKIWPLLNSHVIAPVIHTVLPLGKVAMAHDIMEK---SEHIGK 327 (332)
Q Consensus 256 -----~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~l~p~i~~~~~l~~i~~A~~~l~~---g~~~GK 327 (332)
T Consensus 430 lTr~lA~E~a~~gIrVN~I~PG~i~T~~~~~~~~~~-~~~~~~~~~~--~P-l~R~g~pediA~~v~fLaSd~a~~iTG~ 505 (530)
T PRK06484 430 LTRCLAAELAPHGIRVNTVAPGYILTPAVQALLASG-RRDMNSIRRR--IP-LGRLGQPEEVAEAAYFLASPAASYINGA 505 (530)
T ss_pred HHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHCC-HHHHHHHHHC--CC-CCCCCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999999996043919998987778870454433135-7889999855--99-8997789999999999828500686688
Q ss_pred EEE
Q ss_conf 898
Q gi|254780290|r 328 IIL 330 (332)
Q Consensus 328 vVi 330 (332)
T Consensus 506 ~i~ 508 (530)
T PRK06484 506 TLQ 508 (530)
T ss_pred EEE
T ss_conf 798