HHsearch alignment for GI: 254780290 and conserved domain: PRK08219

Probab=94.92  E-value=0.0019  Score=41.86  Aligned_cols=100  Identities=21%  Similarity=0.309  Sum_probs=59.7

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2222113444443222221222222221112232211111-122332-22222222111122222222211122221111
Q gi|254780290|r  147 QTVLIHGGSSGIGTTAIQLASYFGATVYTTAKSEEKCLAC-LKLGAK-HAINYLKEDFLEILQKETQGRGIDIILDMVGA  224 (332)
Q Consensus       147 ~~vlV~ga~g~vG~~a~qla~~~G~~vi~~~~~~~~~~~~-~~lGa~-~vi~~~~~~~~~~i~~~t~g~g~Divid~~G~  224 (332)
T Consensus         4 KvalITGas~GIG~aia~~la-~~g~vv~~~r~~~~l~~l~~~~~~~~~~~Dlt~~~~i~~~~~~~--~~iD~lVnnAG~   80 (226)
T PRK08219          4 PTALITGASRGIGAAIARALA-RTHTLLLAGRPSERLDAVAARLGATTWPADLTDPEAIAAAVEPL--DRLDVLVHNAGV   80 (226)
T ss_pred             CEEEEECCCHHHHHHHHHHHH-HCCCEEEEECCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHC--CCCCEEEECCCC
T ss_conf             999992846499999999999-69989999898899999999709937860579999999999965--998899989968


Q ss_pred             C---CC--------C---------------CCCCCC-CCCCCCEEEEECCCC
Q ss_conf             1---12--------2---------------222112-234530479833787
Q gi|254780290|r  225 E---YL--------N---------------QHLTLL-SKEGKLIIISFLGGN  249 (332)
Q Consensus       225 ~---~~--------~---------------~~~~~l-~~~G~iv~~G~~~~~  249 (332)
T Consensus        81 ~~~~~~~~~~~~~~~~~~~vNl~~~~~l~~~~lp~m~~~~G~IV~isS~~g~  132 (226)
T PRK08219         81 AELGPVAESTVDEWRATLDVNVVAPAELTRLLLPALRAARGHVVFINSGAGL  132 (226)
T ss_pred             CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHC
T ss_conf             9998737699999999999866999999999999999739849999476764