HHsearch alignment for GI: 254780290 and conserved domain: PRK12827
>PRK12827 short chain dehydrogenase; Provisional.
Probab=94.19 E-value=0.0046 Score=39.39 Aligned_cols=177 Identities=17% Similarity=0.194 Sum_probs=87.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC-------CCCCCCCC---CCCCCCC----CCCCCCCC
Q ss_conf 222222113444443222221222222221112232211-111-------12233222---2222221----11122222
Q gi|254780290|r 145 SGQTVLIHGGSSGIGTTAIQLASYFGATVYTTAKSEEKC-LAC-------LKLGAKHA---INYLKED----FLEILQKE 209 (332)
Q Consensus 145 ~g~~vlV~ga~g~vG~~a~qla~~~G~~vi~~~~~~~~~-~~~-------~~lGa~~v---i~~~~~~----~~~~i~~~ 209 (332)
T Consensus 5 ~gKvalVTGas~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~v~~~~~~ 84 (251)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEAEAVAALIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (251)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 99889996825589999999999879989998488853289999999999964984999990389999999999999998
Q ss_pred CCCCCCCCCCCCCCCC---C--------CC---------------CCCC-CC--CCCCCCEEEEECCCCCCCCCC-----
Q ss_conf 2222111222211111---1--------22---------------2221-12--234530479833787543222-----
Q gi|254780290|r 210 TQGRGIDIILDMVGAE---Y--------LN---------------QHLT-LL--SKEGKLIIISFLGGNIATEIN----- 255 (332)
Q Consensus 210 t~g~g~Divid~~G~~---~--------~~---------------~~~~-~l--~~~G~iv~~G~~~~~~~~~~~----- 255 (332)
T Consensus 85 ~G--~iDiLVNnAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~~~m~~~~~~G~IInisS~~~~~~~~~~~~Y~a 162 (251)
T PRK12827 85 FG--RLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAA 162 (251)
T ss_pred CC--CCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCHHHHH
T ss_conf 39--9979998998899999034999999999999859999999999999998389946999825333557898688999
Q ss_pred ------------CCHHHCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCC-
Q ss_conf ------------4334305321677751240001137899999999999998698310212474189999999999829-
Q gi|254780290|r 256 ------------LNPIISKRITITGSTLRRRTDIAKQSIRDSLQLKIWPLLNSHVIAPVIHTVLPLGKVAMAHDIMEKS- 322 (332)
Q Consensus 256 ------------~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~l~p~i~~~~~l~~i~~A~~~l~~g- 322 (332)
T Consensus 163 sKaav~~lTr~lA~e~a~~gIrVNaV~PG~i~-T--~~~~~~~-~~~~~~~~~~--~P-l~R~g~pediA~~v~fLaSd~ 235 (251)
T PRK12827 163 SKAGLIGLTKTLANELAPRGITVNAVAPGAIN-T--PMADNAA-MTGGEHALNP--VP-VQRLGEPDEVAALVAFLVSDA 235 (251)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC-C--HHHHCCC-HHHHHHHHHC--CC-CCCCCCHHHHHHHHHHHHCCH
T ss_conf 99999999999999965049699999648898-7--2011038-7699999847--99-889778999999999995833
Q ss_pred --CCCCEEEE
Q ss_conf --98132898
Q gi|254780290|r 323 --EHIGKIIL 330 (332)
Q Consensus 323 --~~~GKvVi 330 (332)
T Consensus 236 s~~iTG~~i~ 245 (251)
T PRK12827 236 ASYVTGQVIP 245 (251)
T ss_pred HCCCCCCEEE
T ss_conf 2496586487