HHsearch alignment for GI: 254780290 and conserved domain: PRK12937
>PRK12937 short chain dehydrogenase; Provisional.
Probab=95.61 E-value=0.0011 Score=43.45 Aligned_cols=177 Identities=16% Similarity=0.152 Sum_probs=90.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC----CCCCCCCC---CCCCCCCCC----CCCCCCCCCCC
Q ss_conf 2222221134444432222212222222211122322-111----11122332---222222221----11122222222
Q gi|254780290|r 145 SGQTVLIHGGSSGIGTTAIQLASYFGATVYTTAKSEE-KCL----ACLKLGAK---HAINYLKED----FLEILQKETQG 212 (332)
Q Consensus 145 ~g~~vlV~ga~g~vG~~a~qla~~~G~~vi~~~~~~~-~~~----~~~~lGa~---~vi~~~~~~----~~~~i~~~t~g 212 (332)
T Consensus 4 sgK~alVTGgs~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~g- 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAMADELVEEIEAAGGRAIAVQADVADAAAVDRLFEAAETAFG- 82 (245)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC-
T ss_conf 9988999485778999999999987999999769986899999999996599589998378999999999999999819-
Q ss_pred CCCCCCCCCCCCCC--------------------------CCCCCCCCCCCCCCEEEEECCCCCCCCCC-----------
Q ss_conf 21112222111111--------------------------22222112234530479833787543222-----------
Q gi|254780290|r 213 RGIDIILDMVGAEY--------------------------LNQHLTLLSKEGKLIIISFLGGNIATEIN----------- 255 (332)
Q Consensus 213 ~g~Divid~~G~~~--------------------------~~~~~~~l~~~G~iv~~G~~~~~~~~~~~----------- 255 (332)
T Consensus 83 -~iDilVnNAg~~~~~~~~~~~~e~w~~~~~vNl~~~~~~~~~~~~~m~~~G~IInisS~~~~~~~~~~~~Y~asKaav~ 161 (245)
T PRK12937 83 -RIDVLVNSAGIMPLAPIADGDLEGFDRTIAVNLRGAFNVLGEAARHLRRGGRIINLSTSVIARALPGYGPYAASKAAVE 161 (245)
T ss_pred -CCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHCCCCCCCHHHHHHHHHHH
T ss_conf -9889998054899988134999999999999859999999999999972882999973000578999488999999999
Q ss_pred ------CCHHHCCCCEEEEEEECCCH-HCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCC---CCC
Q ss_conf ------43343053216777512400-01137899999999999998698310212474189999999999829---981
Q gi|254780290|r 256 ------LNPIISKRITITGSTLRRRT-DIAKQSIRDSLQLKIWPLLNSHVIAPVIHTVLPLGKVAMAHDIMEKS---EHI 325 (332)
Q Consensus 256 ------~~~~~~~~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~i~~g~l~p~i~~~~~l~~i~~A~~~l~~g---~~~ 325 (332)
T Consensus 162 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~----~~~~e~~~~~~~~--~Pl-~R~g~pedia~~v~fL~S~~a~~iT 234 (245)
T PRK12937 162 GLVHVLANELRGRGITVNAVAPGPTATELFFN----GKSPEQIDQLARL--APL-ERLGEPDEIAAAVAFLAGPDGAWVN 234 (245)
T ss_pred HHHHHHHHHHHHHCEEEEEEEECCCCCCCCCC----CCCHHHHHHHHHC--CCC-CCCCCHHHHHHHHHHHHCCHHCCCC
T ss_conf 99999999960519299999764588755436----7999999999856--999-9983999999999999687024913
Q ss_pred CEEEE
Q ss_conf 32898
Q gi|254780290|r 326 GKIIL 330 (332)
Q Consensus 326 GKvVi 330 (332)
T Consensus 235 G~~i~ 239 (245)
T PRK12937 235 GQVLR 239 (245)
T ss_pred CCEEE
T ss_conf 87368