HHsearch alignment for GI: 254780290 and conserved domain: TIGR01136
>TIGR01136 cysKM cysteine synthases; InterPro: IPR005856 This model discriminates cysteine synthases (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblance to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded. Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysM differs from CysK in that it can also use thiosulphate instead of sulphide, to produce cysteine thiosulphonate instead of cysteine. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine.
Probab=91.74 E-value=0.024 Score=34.62 Aligned_cols=105 Identities=21% Similarity=0.242 Sum_probs=69.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCC---------------
Q ss_conf 122222222222211344444322222122222222111---22322111111223322222222---------------
Q gi|254780290|r 138 FQTANLRSGQTVLIHGGSSGIGTTAIQLASYFGATVYTT---AKSEEKCLACLKLGAKHAINYLK--------------- 199 (332)
Q Consensus 138 ~~~~~~~~g~~vlV~ga~g~vG~~a~qla~~~G~~vi~~---~~~~~~~~~~~~lGa~~vi~~~~--------------- 199 (332)
T Consensus 54 E~~G~lk~G~-~iiEaTSGNTGIaLAMvAAarGYkliL~MPetmS~ERr~~l~ayGA~L~LT~~~~GM~GAi~kA~el~~ 132 (315)
T TIGR01136 54 EKRGLLKPGT-TIIEATSGNTGIALAMVAAARGYKLILTMPETMSLERRKLLKAYGAELILTPAEEGMKGAIDKAEELAA 132 (315)
T ss_pred HHCCCCCCCC-EEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 8658878888-898427784489999999861991899858871789999998709669883733575778999999998
Q ss_pred -----------------CC-----CCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC---CCC-CCEEEE
Q ss_conf -----------------21-----1112222222221112222111-111222221122---345-304798
Q gi|254780290|r 200 -----------------ED-----FLEILQKETQGRGIDIILDMVG-AEYLNQHLTLLS---KEG-KLIIIS 244 (332)
Q Consensus 200 -----------------~~-----~~~~i~~~t~g~g~Divid~~G-~~~~~~~~~~l~---~~G-~iv~~G 244 (332)
T Consensus 133 ~~p~~~~~l~QF~NpaNp~~H~~TTGpEIw~dt~G~-id~FVaG~GTGGTItGvgr~LK~~~pkG~~i~i~a 203 (315)
T TIGR01136 133 ETPNKYVMLDQFENPANPEAHRKTTGPEIWRDTDGR-IDHFVAGVGTGGTITGVGRVLKEQNPKGKNIQIVA 203 (315)
T ss_pred HCCCCEEECCCCCCCCHHHHHHCCCHHHHHHHCCCC-EEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 588962103325885214762305657999732892-35899711567511168989863268996179999