HHsearch alignment for GI: 254780290 and conserved domain: TIGR01318
>TIGR01318 gltD_gamma_fam glutamate synthase, small subunit; InterPro: IPR006006 One pathway for the assimilation of ammonia and glutamate biosynthesis involves glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate. 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including Escherichia coli. ; GO: 0016639 oxidoreductase activity acting on the CH-NH2 group of donors NAD or NADP as acceptor, 0006537 glutamate biosynthetic process.
Probab=91.37 E-value=0.073 Score=31.42 Aligned_cols=51 Identities=22% Similarity=0.375 Sum_probs=26.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC--------CCCCCCCCCCCCCCC
Q ss_conf 222222113444443222221222222-2211122322--------111111223322222
Q gi|254780290|r 145 SGQTVLIHGGSSGIGTTAIQLASYFGA-TVYTTAKSEE--------KCLACLKLGAKHAIN 196 (332)
Q Consensus 145 ~g~~vlV~ga~g~vG~~a~qla~~~G~-~vi~~~~~~~--------~~~~~~~lGa~~vi~ 196 (332)
T Consensus 291 ~Gk~VVVLGG-GDTaMDCvRTaiR~GA~~VTC~YRRDE~nMPGSrrEV~NAREEGV~F~Fn 350 (480)
T TIGR01318 291 EGKRVVVLGG-GDTAMDCVRTAIRLGAKKVTCAYRRDEANMPGSRREVANAREEGVEFLFN 350 (480)
T ss_pred CCCEEEEECC-CCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHCCCHHCCCEEEEE
T ss_conf 7766898588-87525788999981776131266536778787755526611117113210