HHsearch alignment for GI: 254780290 and conserved domain: TIGR01830
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase; InterPro: IPR011284 This entry represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis found in many plant and bacterial species. This enzyme is involved in type II fatty acid biosynthesis, where the individual metabolic transformations are carried out by different enzymes rather than by a single enzyme as occurs in type I fatty acid biosynthesis . Structural studies show that the enzyme is a tetramer which forms a typical Rossman fold , . Unlike other members of the short-chain dehydrogenase/reductase superfamily, the enzyme undergoes a marked conformational change upon binding of the NADP(H)cofactor. This conformational change aligns the side chains of the catalytic triad at the active site in an active conformation and increases the affinity of the enzyme for its substrate.; GO: 0004316 3-oxoacyl-[acyl-carrier-protein] reductase activity, 0051287 NAD binding, 0006633 fatty acid biosynthetic process.
Probab=94.62 E-value=0.0028 Score=40.78 Aligned_cols=168 Identities=23% Similarity=0.328 Sum_probs=93.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCC----CCCCCCCCC---CCCCCCC-CCCCCCCCCCC-CCCCCCC
Q ss_conf 22113444443222221222222221112232-2111----111223322---2222222-11112222222-2211122
Q gi|254780290|r 149 VLIHGGSSGIGTTAIQLASYFGATVYTTAKSE-EKCL----ACLKLGAKH---AINYLKE-DFLEILQKETQ-GRGIDII 218 (332)
Q Consensus 149 vlV~ga~g~vG~~a~qla~~~G~~vi~~~~~~-~~~~----~~~~lGa~~---vi~~~~~-~~~~~i~~~t~-g~g~Div 218 (332)
T Consensus 1 AlVTGasRGIG~AIA~~LA~~Ga~V~i~y~~~e~~~~~~~~e~~~~G~~a~~~~~dvs~~~~~~~~~~~~~~~~G-iDiL 79 (238)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRTSEEGAEEVVEEIKELGVKAAGVVLDVSDREDVKALVEEAEEELG-IDIL 79 (238)
T ss_pred CEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-CEEE
T ss_conf 967167861679999999867995999659825788899999985697599996038888999999999999829-9089
Q ss_pred CCCCC--CCC-----------------CCCCCCCC---------CCCCCCEEEEECCC---CCC--------------CC
Q ss_conf 22111--111-----------------22222112---------23453047983378---754--------------32
Q gi|254780290|r 219 LDMVG--AEY-----------------LNQHLTLL---------SKEGKLIIISFLGG---NIA--------------TE 253 (332)
Q Consensus 219 id~~G--~~~-----------------~~~~~~~l---------~~~G~iv~~G~~~~---~~~--------------~~ 253 (332)
T Consensus 80 VNNAGITrD~Ll~RMk~edWd~Vi~~NL~g~F~~t~~v~~~M~K~R~GrIINisSVVG~~GN~GQaNYaASKAG~IGftK 159 (238)
T TIGR01830 80 VNNAGITRDNLLMRMKEEDWDAVINVNLKGVFNLTQAVLRPMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTK 159 (238)
T ss_pred EECCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 97874134301004885568999986126687888998898875067434861002000068742678888755899999
Q ss_pred CCCCHHHCCCCEEEEE----EECCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE-HHHHHHHHHHHHCCC---CC
Q ss_conf 2243343053216777----512400011378999999999999986983102124741-899999999998299---81
Q gi|254780290|r 254 INLNPIISKRITITGS----TLRRRTDIAKQSIRDSLQLKIWPLLNSHVIAPVIHTVLP-LGKVAMAHDIMEKSE---HI 325 (332)
Q Consensus 254 ~~~~~~~~~~~~i~g~----~~~~~~~~~~~~~~~~~~~~~~~~i~~g~l~p~i~~~~~-l~~i~~A~~~l~~g~---~~ 325 (332)
T Consensus 160 SlAkElasRnItVNaVAPGFI~TdMT~~L~e~~~~~------------~l~~IPLgR~G~pEeVA~~v~FLASd~AsYIT 227 (238)
T TIGR01830 160 SLAKELASRNITVNAVAPGFIETDMTDKLSEKVKKA------------MLSQIPLGRFGTPEEVANAVAFLASDEASYIT 227 (238)
T ss_pred HHHHHCCCCCCEEEEECCCCCCCCCCHHCCHHHHHH------------HHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 999860368705888748998970002169889999------------98527723267765699999973251247425
Q ss_pred CEEE
Q ss_conf 3289
Q gi|254780290|r 326 GKII 329 (332)
Q Consensus 326 GKvV 329 (332)
T Consensus 228 Gqv~ 231 (238)
T TIGR01830 228 GQVI 231 (238)
T ss_pred CCEE
T ss_conf 5166