HHsearch alignment for GI: 254780290 and conserved domain: TIGR02632
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; InterPro: IPR013454 Rhamnose is a methyl-pentose sugar which is found as a constituent of pectin within the cell walls of dicotyledonous plants and has also been found in the mucilage of a number of legume plants . RhaD from Rhizobium leguminosarum bv. trifolii is encoded by a gene occurring in a rhamnose utilisation cluster, and is necessary for growth on this compound . This protein is predicted to be a bifunctional NAD-dependent aldolase/dehydrogenase..
Probab=95.31 E-value=0.0026 Score=41.00 Aligned_cols=215 Identities=21% Similarity=0.273 Sum_probs=109.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 233333221111111222222232221222222333222111222222--222222113444443222221222222221
Q gi|254780290|r 97 GGGYAEYCLSHQGHTLPIPKGYNAIQAASLPESFFTVWANLFQTANLR--SGQTVLIHGGSSGIGTTAIQLASYFGATVY 174 (332)
Q Consensus 97 ~G~~ae~~~~~~~~~~~iP~~~s~~~aa~l~~~~~tA~~~l~~~~~~~--~g~~vlV~ga~g~vG~~a~qla~~~G~~vi 174 (332)
T Consensus 386 A~Av~~Y~~L~e~E~F~I-EYW~LEeaK------------L~rmP~ek~LA~~Va~VtGGasGIG~~~A~rL~~eGAhvV 452 (709)
T TIGR02632 386 AEAVSEYAALPEQEAFDI-EYWALEEAK------------LRRMPKEKELARRVAFVTGGASGIGRETARRLVDEGAHVV 452 (709)
T ss_pred CCHHHHCCCCCCCCCCCC-CHHHHHHHH------------HHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEE
T ss_conf 111210258751103341-011679998------------7247659671570688973886526899999973697799
Q ss_pred CCCCCCCCC-----CCCCCCCCCCCCCCCC----C-------CC--CCCCCC------CCCCCCCCCCCCCCCC----C-
Q ss_conf 112232211-----1111223322222222----2-------11--112222------2222211122221111----1-
Q gi|254780290|r 175 TTAKSEEKC-----LACLKLGAKHAINYLK----E-------DF--LEILQK------ETQGRGIDIILDMVGA----E- 225 (332)
Q Consensus 175 ~~~~~~~~~-----~~~~~lGa~~vi~~~~----~-------~~--~~~i~~------~t~g~g~Divid~~G~----~- 225 (332)
T Consensus 453 ~aD~d~~~a~~va~~~~~~fG~d~a~AGsdisaCGPaiGl~~DvT~e~~v~~~f~~v~~~yG-GvD~vv~nAGi~~S~p~ 531 (709)
T TIGR02632 453 LADLDAEAAEAVAAEIVDKFGADKAVAGSDISACGPAIGLKLDVTDEEAVKAAFAEVALAYG-GVDIVVNNAGIAVSSPL 531 (709)
T ss_pred EECCCHHHHHHHHHHHHHHCCCCCEECCCCHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHC-CEEEEEECCCHHCCCCC
T ss_conf 96236578999999986313888121143200046710027631758999999999999749-84787652530105770
Q ss_pred -------CCC---------------CCCCCCCC---CCCCEEEEECCCCCCCCCC------------CCH-----HHCCC
Q ss_conf -------122---------------22211223---4530479833787543222------------433-----43053
Q gi|254780290|r 226 -------YLN---------------QHLTLLSK---EGKLIIISFLGGNIATEIN------------LNP-----IISKR 263 (332)
Q Consensus 226 -------~~~---------------~~~~~l~~---~G~iv~~G~~~~~~~~~~~------------~~~-----~~~~~ 263 (332)
T Consensus 532 ~~t~r~~~W~l~~di~atG~FLVareA~r~~~~Q~lGG~~VfiaSkNav~A~kn~~AY~aaKA~~~Hl~R~LA~Ela~~G 611 (709)
T TIGR02632 532 EETERLEEWDLNLDILATGYFLVAREAARLMRKQGLGGNIVFIASKNAVVAGKNASAYSAAKAAEAHLARCLAAELAELG 611 (709)
T ss_pred HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 23221554320120101200358889999997317985567761100011178840555899999989999998147886
Q ss_pred CE---------EEEEEECCCHHCCH-----------HHHHHHHHHHHHHHHHCCC-CCCCCEEEEEHHHHHHHHHHHHC-
Q ss_conf 21---------67775124000113-----------7899999999999998698-31021247418999999999982-
Q gi|254780290|r 264 IT---------ITGSTLRRRTDIAK-----------QSIRDSLQLKIWPLLNSHV-IAPVIHTVLPLGKVAMAHDIMEK- 321 (332)
Q Consensus 264 ~~---------i~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~g~-l~p~i~~~~~l~~i~~A~~~l~~- 321 (332)
T Consensus 612 iRVNtV~PdaVl~GS~if~~~W~~~raA~ygi~ftadePtdvl~d~L~~fY~~RslLk~---~v~p-~d~AeAvf~L~S~ 687 (709)
T TIGR02632 612 IRVNTVNPDAVLRGSGIFDGEWREERAAAYGIPFTADEPTDVLADKLEEFYAKRSLLKR---EVLP-ADIAEAVFFLASD 687 (709)
T ss_pred EEEECCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC---CCCC-HHHHHHHHHHHCC
T ss_conf 46401065001105521533678888877077434687235788889889875432377---6680-8899999997345
Q ss_pred --CCCCCEEE
Q ss_conf --99813289
Q gi|254780290|r 322 --SEHIGKII 329 (332)
Q Consensus 322 --g~~~GKvV 329 (332)
T Consensus 688 ~~~~tTG~~i 697 (709)
T TIGR02632 688 KLEKTTGLII 697 (709)
T ss_pred CCCCCCCCEE
T ss_conf 1010278664