HHsearch alignment for GI: 254780290 and conserved domain: TIGR02819
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent; InterPro: IPR014184 Members of this entry represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols. This entry includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this entry have a tightly bound NAD that can act as a true cofactor, rather than a co-substrate in dehydrogenase reactions and in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent..
Probab=99.69 E-value=1.9e-17 Score=134.58 Aligned_cols=310 Identities=22% Similarity=0.278 Sum_probs=202.6
Q ss_pred EEEEEECCCCCCCEEEEEEECCCCCC----------------CCEEEEEEEEEEECHHHHHHHCCCCCCCCCCCCEECCC
Q ss_conf 08999915688530799982378778----------------86289999999827878999868877876687300330
Q gi|254780290|r 7 MRHVAMSGYGKSNVMFLAESPIPQPQ----------------KEEILIKVEAIGVNRPDVMQRKGLYPPPKNANPILGLE 70 (332)
Q Consensus 7 Mka~v~~~~g~~~~l~~~~~~~P~~~----------------~~~vlV~v~~~~in~~D~~~~~G~~~~~~~~p~v~G~e 70 (332)
T Consensus 3 n~~v~y~G~G~v---~~~~i~~P~~~~~~~~~~~~~~~~~~~~hGvilk~~~tniCGsdqhmvrGrtt--a~~~lvlGhe 77 (403)
T TIGR02819 3 NKGVVYLGAGKV---EVQDIDYPKLELKDGPGVNKANVTRKIEHGVILKVVTTNICGSDQHMVRGRTT--APTGLVLGHE 77 (403)
T ss_pred CCEEEEECCCEE---EEEECCCCCEEECCCCCCCHHHCCCEECCCEEEEEEEEECCCCCCCEEECCCC--CCCCCEEEEE
T ss_conf 844788348716---88642686112024666420110330015448987532003564403303222--5444264100
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-------C--------------------------CCC----CCCCCCCCCCC--CCCC
Q ss_conf 0023222222122222233332-------2--------------------------112----23333322111--1111
Q gi|254780290|r 71 VAGKIVDLGENTTHWNIGDEVC-------A--------------------------LVN----GGGYAEYCLSH--QGHT 111 (332)
Q Consensus 71 ~~G~V~~vG~~v~~~~~GdrV~-------~--------------------------~~~----~G~~ae~~~~~--~~~~ 111 (332)
T Consensus 78 itG~~~e~G~dve~~~~Gd~~svPfn~aCGrC~~C~~~~t~~C~~vnP~r~G~ayGyvdmG~W~GGq~~yv~vPyad~~l 157 (403)
T TIGR02819 78 ITGEVIEVGRDVEFLKIGDIVSVPFNIACGRCRNCKEQKTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVLVPYADFNL 157 (403)
T ss_pred CCEEEEEECCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCCHHH
T ss_conf 01246740564002322767750520245620011245762433107787774022445375316630068851111164
Q ss_pred CCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC
Q ss_conf 2222222----322212222223332221112222222222221134444432222212222222-21112232211111
Q gi|254780290|r 112 LPIPKGY----NAIQAASLPESFFTVWANLFQTANLRSGQTVLIHGGSSGIGTTAIQLASYFGAT-VYTTAKSEEKCLAC 186 (332)
Q Consensus 112 ~~iP~~~----s~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlV~ga~g~vG~~a~qla~~~G~~-vi~~~~~~~~~~~~ 186 (332)
T Consensus 158 l~~P~~~~al~k~~dl~~lsdi~PtG~hGa~-~aGv~~G~tvy~aG-aGPvGla~a~~a~llGaa~~ivGd~~~~rla~a 235 (403)
T TIGR02819 158 LKFPDRDQALEKIRDLTMLSDIFPTGYHGAV-TAGVKTGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNEERLAQA 235 (403)
T ss_pred HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCE-ECCCCCCCEEEEEC-CCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHH
T ss_conf 5178667899998877887763267643201-12544575689844-761578887665540313688814536788777
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---------------CCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 122332222222221111222222222111222211111---------------12222211223453047983378754
Q gi|254780290|r 187 LKLGAKHAINYLKEDFLEILQKETQGRGIDIILDMVGAE---------------YLNQHLTLLSKEGKLIIISFLGGNIA 251 (332)
Q Consensus 187 ~~lGa~~vi~~~~~~~~~~i~~~t~g~g~Divid~~G~~---------------~~~~~~~~l~~~G~iv~~G~~~~~~~ 251 (332)
T Consensus 236 ~~~G~e~v~l~~~~~~~~~i~~ilG~~~vd~avd~vGfea~~hG~~~~~e~Pa~vln~~m~~t~~~G~~GiPGlyvt~dP 315 (403)
T TIGR02819 236 RSFGCETVDLKKDATLAEQIEQILGEPEVDCAVDCVGFEAKGHGSDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDP 315 (403)
T ss_pred HHCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCC
T ss_conf 66361278611245247899987087520100012320023367654445327899999998740576157711661788
Q ss_pred CC-----------CCCCHHHCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHHHHHCCCC-CCCCEEEEEHHHHHHHHHHH
Q ss_conf 32-----------2243343053216777512400011378999999999999986983-10212474189999999999
Q gi|254780290|r 252 TE-----------INLNPIISKRITITGSTLRRRTDIAKQSIRDSLQLKIWPLLNSHVI-APVIHTVLPLGKVAMAHDIM 319 (332)
Q Consensus 252 ~~-----------~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~l-~p~i~~~~~l~~i~~A~~~l 319 (332)
T Consensus 316 G~~~~~a~~G~l~~~~G~GWak~~~f~--tGq----~P~~~y~r~lm~ail--~~~~~ia~~v~~~~i~l~~aP~Gy~~f 387 (403)
T TIGR02819 316 GAVDEAAKTGALSLRLGLGWAKSHSFV--TGQ----TPVMKYNRNLMQAIL--HDRVQIAKAVNVKVISLDDAPEGYAEF 387 (403)
T ss_pred CCCHHHHHCCCEEEEEECCEEEEEEEE--CCC----CCHHHHHHHHHHHHH--HHHHHHHHHHCEEEEECCCCCCHHHHH
T ss_conf 742034313605898604310000031--277----420133378999999--866776542120588503364026775
Q ss_pred HCCCCCCEEEEEC
Q ss_conf 8299813289839
Q gi|254780290|r 320 EKSEHIGKIILLP 332 (332)
Q Consensus 320 ~~g~~~GKvVi~P 332 (332)
T Consensus 388 d~G~~~-kfv~~P 399 (403)
T TIGR02819 388 DKGAAK-KFVIDP 399 (403)
T ss_pred CCCCCC-EEEECC
T ss_conf 045430-367465