HHsearch alignment for GI: 254780290 and conserved domain: TIGR02823
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family; InterPro: IPR014188 This entry represents a subfamily of the alcohol dehydrogenase, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This entry includes YhdH from Escherichia coli and YhfP from Bacillus subtilis both of which bind NADPH or NAD, but not zinc. Both proteins have been studied crystallographically for insight into function. .
Probab=100.00 E-value=0 Score=389.46 Aligned_cols=314 Identities=19% Similarity=0.292 Sum_probs=273.3
Q ss_pred EEEEECC-CCC-CCEEEEEEECCCCCCCCEEEEEEEEEEECHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC
Q ss_conf 8999915-688-53079998237877886289999999827878999868877876687300330002322222212222
Q gi|254780290|r 8 RHVAMSG-YGK-SNVMFLAESPIPQPQKEEILIKVEAIGVNRPDVMQRKGLYPPPKNANPILGLEVAGKIVDLGENTTHW 85 (332)
Q Consensus 8 ka~v~~~-~g~-~~~l~~~~~~~P~~~~~~vlV~v~~~~in~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~ 85 (332)
T Consensus 1 ~Alvv~~d~~~~~~~~~~~~l~~~~Lp~GdVli~V~YSs~NYKDALA~tg~g~v~R~yP~~PGID~aG~Vv~--S~dp~F 78 (330)
T TIGR02823 1 KALVVEKDDEDGKVSAEVEELDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDLAGTVVS--SEDPRF 78 (330)
T ss_pred CCEEEEEECCCCCEEEEEEEEEHHHCCCCCEEEEEEECCCCHHHHHEECCCCCEEEECCCCCCCCCEEEEEE--CCCCCC
T ss_conf 915888755898489999982065578997399999868763033101387976887787688175468984--488775
Q ss_pred CCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCC-CCCCC-CCCCCCCC
Q ss_conf 2233332------2112233333221111111222222232221222222333222111--2222-22222-22211344
Q gi|254780290|r 86 NIGDEVC------ALVNGGGYAEYCLSHQGHTLPIPKGYNAIQAASLPESFFTVWANLF--QTAN-LRSGQ-TVLIHGGS 155 (332)
Q Consensus 86 ~~GdrV~------~~~~~G~~ae~~~~~~~~~~~iP~~~s~~~aa~l~~~~~tA~~~l~--~~~~-~~~g~-~vlV~ga~ 155 (332)
T Consensus 79 ~~GD~VivTGyglG~~H~GGysqyaRVp~dWlVpLP~glsl~eAM~~GTAGfTAaL~V~aLe~~Gl~~P~~GpVlVTGAt 158 (330)
T TIGR02823 79 RPGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLLTPEDGPVLVTGAT 158 (330)
T ss_pred CCCCEEEEEEECCCCCCCCCCEEEEEECHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC
T ss_conf 78871899740245651576223567332310158898898899986007789999999999726888888878870677
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 4443222221222222221112232211-111122332222222221111--2222222221112222111111222221
Q gi|254780290|r 156 SGIGTTAIQLASYFGATVYTTAKSEEKC-LACLKLGAKHAINYLKEDFLE--ILQKETQGRGIDIILDMVGAEYLNQHLT 232 (332)
Q Consensus 156 g~vG~~a~qla~~~G~~vi~~~~~~~~~-~~~~~lGa~~vi~~~~~~~~~--~i~~~t~g~g~Divid~~G~~~~~~~~~ 232 (332)
T Consensus 159 GGVGS~Av~~L~~lGY~V~A~tGk~~~~~~yL~~LGA~evi~R~~--l~~~a~~kPL~k-~~WAGAvDtVGG~~La~~l~ 235 (330)
T TIGR02823 159 GGVGSLAVAILSKLGYEVVASTGKAEEEVEYLKELGASEVIDREE--LSEDAPGKPLEK-ERWAGAVDTVGGKTLANVLA 235 (330)
T ss_pred CCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHH--CCCCCCCCCCCC-CCCCCEEECCCHHHHHHHHH
T ss_conf 877899999998379769997378377889998658110577112--276878886312-22221574687579999998
Q ss_pred CCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHH
Q ss_conf 12234530479833787543222433430532167775124000113789999999999999869831021247418999
Q gi|254780290|r 233 LLSKEGKLIIISFLGGNIATEINLNPIISKRITITGSTLRRRTDIAKQSIRDSLQLKIWPLLNSHVIAPVIHTVLPLGKV 312 (332)
Q Consensus 233 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~l~p~i~~~~~l~~i 312 (332)
T Consensus 236 ~~~ygG~VA~cGlagG~~L-~tTV~PFILRGV~LlGID----SV~~p~~~R~~~W~RLA~dl~~~~L~~~~~~ei~L~el 310 (330)
T TIGR02823 236 QLKYGGAVAACGLAGGADL-PTTVLPFILRGVSLLGID----SVYCPMALREAAWQRLATDLKPRNLESLTTQEITLEEL 310 (330)
T ss_pred HHCCCCEEEEEECCCCCCC-CCEECCHHHCCCEEEEEC----HHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHH
T ss_conf 4068978999942679863-501255043285388853----00188789999999887415977888784200157768
Q ss_pred HHHHHHHHCCCCCCEEEEE
Q ss_conf 9999999829981328983
Q gi|254780290|r 313 AMAHDIMEKSEHIGKIILL 331 (332)
Q Consensus 313 ~~A~~~l~~g~~~GKvVi~ 331 (332)
T Consensus 311 p~~~~~~l~G~~~GRtvV~ 329 (330)
T TIGR02823 311 PEAAEQILAGQVRGRTVVD 329 (330)
T ss_pred HHHHHHHHCCCCCCEEEEE
T ss_conf 9999999738830058774