HHsearch alignment for GI: 254780290 and conserved domain: TIGR03206
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.90 E-value=0.00053 Score=45.57 Aligned_cols=181 Identities=14% Similarity=0.147 Sum_probs=92.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC---CCCCCCCC----CCCCCCCCCCCC
Q ss_conf 222222113444443222221222222221112232211111----1223322---22222221----111222222222
Q gi|254780290|r 145 SGQTVLIHGGSSGIGTTAIQLASYFGATVYTTAKSEEKCLAC----LKLGAKH---AINYLKED----FLEILQKETQGR 213 (332)
Q Consensus 145 ~g~~vlV~ga~g~vG~~a~qla~~~G~~vi~~~~~~~~~~~~----~~lGa~~---vi~~~~~~----~~~~i~~~t~g~ 213 (332)
T Consensus 2 ~gKvalITG~s~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~~~~~~Dv~d~~~v~~~v~~~~~~~G-- 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALG-- 79 (250)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCC--
T ss_conf 519999968576899999999998799999997988999999999995399289999448999999999999999759--
Q ss_pred CCCCCCCCCCCCC-----------CC---------------CCCCCC--CCCCCCEEEEECCCCCCCCCC----------
Q ss_conf 1112222111111-----------22---------------222112--234530479833787543222----------
Q gi|254780290|r 214 GIDIILDMVGAEY-----------LN---------------QHLTLL--SKEGKLIIISFLGGNIATEIN---------- 255 (332)
Q Consensus 214 g~Divid~~G~~~-----------~~---------------~~~~~l--~~~G~iv~~G~~~~~~~~~~~---------- 255 (332)
T Consensus 80 ~iDilvnnAg~~~~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav 159 (250)
T TIGR03206 80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGL 159 (250)
T ss_pred CCCEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHHHHHHHH
T ss_conf 99799989888999890349999999999998299999999999999974991799965577576899858899999999
Q ss_pred -------CCHHHCCCCEEEEEEECCCHHCCHHHHHH--HHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHC---CC
Q ss_conf -------43343053216777512400011378999--9999999999869831021247418999999999982---99
Q gi|254780290|r 256 -------LNPIISKRITITGSTLRRRTDIAKQSIRD--SLQLKIWPLLNSHVIAPVIHTVLPLGKVAMAHDIMEK---SE 323 (332)
Q Consensus 256 -------~~~~~~~~~~i~g~~~~~~~~~~~~~~~~--~~~~~~~~~i~~g~l~p~i~~~~~l~~i~~A~~~l~~---g~ 323 (332)
T Consensus 160 ~~ltk~lA~ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~e~~~~~~~~~--~Pl-~R~g~pediA~~v~fL~Sd~s~~ 236 (250)
T TIGR03206 160 VAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRA--IPL-GRLGQPDDLPGAILFFSSDDASF 236 (250)
T ss_pred HHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHC--CCC-CCCCCHHHHHHHHHHHHCCHHCC
T ss_conf 999999999965329189999768888677898764438869999999847--998-99839999999999995834338
Q ss_pred CCCEEEE
Q ss_conf 8132898
Q gi|254780290|r 324 HIGKIIL 330 (332)
Q Consensus 324 ~~GKvVi 330 (332)
T Consensus 237 itG~~i~ 243 (250)
T TIGR03206 237 ITGQVLS 243 (250)
T ss_pred CCCCEEE
T ss_conf 4588388