HHsearch alignment for GI: 254780290 and conserved domain: pfam01488
>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=94.05 E-value=0.0062 Score=38.54 Aligned_cols=72 Identities=22% Similarity=0.321 Sum_probs=49.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC-CCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 222222113444443222221222222-221112232211-1111223322--222222211112222222221112222
Q gi|254780290|r 145 SGQTVLIHGGSSGIGTTAIQLASYFGA-TVYTTAKSEEKC-LACLKLGAKH--AINYLKEDFLEILQKETQGRGIDIILD 220 (332)
Q Consensus 145 ~g~~vlV~ga~g~vG~~a~qla~~~G~-~vi~~~~~~~~~-~~~~~lGa~~--vi~~~~~~~~~~i~~~t~g~g~Divid 220 (332)
T Consensus 11 ~~~~vlVIGa-G~~~~~~~~~L~~~g~~~i~v~nRt~~ka~~la~~~~~~~~~~~~~~--~l~~~l~------~~DivI~ 81 (134)
T pfam01488 11 KGKKVLLIGA-GEMARLAAKHLLSKGAKKITIANRTLEKAKELAEEFGGEEVEALPLD--ELEELLA------EADIVIS 81 (134)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECH--HHHHHHH------HCCEEEE
T ss_conf 4898999996-09999999999975998899954757899999998499725898513--5441363------1999999
Q ss_pred CCCCC
Q ss_conf 11111
Q gi|254780290|r 221 MVGAE 225 (332)
Q Consensus 221 ~~G~~ 225 (332)
T Consensus 82 aT~s~ 86 (134)
T pfam01488 82 ATSAP 86 (134)
T ss_pred ECCCC
T ss_conf 25999