RPSBLAST alignment for GI: 254780290 and conserved domain: cd08244
>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324
Score = 139 bits (351), Expect = 2e-33
Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 12/331 (3%)
Query: 7 MRHVAMSGYGKSNVMFLAESPIPQPQKEEILIKVEAIGVNRPDVMQRKGLYPPPKNANP- 65
MR + + +G V+ + P P P ++ I V A GV+ D R G P P
Sbjct: 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELP 60
Query: 66 -ILGLEVAGKIVDLGENT-THWNIGDEVCA--LVNGGGYAEYCLSHQGHTLPIPKGYNAI 121
+ G EVAG + +G W +G V A GGGYAE ++ P+P G +
Sbjct: 61 YVPGGEVAGVVDAVGPGVDPAW-LGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLE 119
Query: 122 QAASLPESFFTVWANLFQTANLRSGQTVLIHGGSSGIGTTAIQLASYFGATVYTTAKSEE 181
A ++ T L A L G VL+ + G+G+ +QLA GATV A
Sbjct: 120 AAVAVVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPA 178
Query: 182 KCLACLKLGAKHAINYLKEDFLEILQKETQGRGIDIILDMVGAEYLNQHLTLLSKEGKLI 241
K LGA A++Y + D+ + +++ G G+ ++LD VG L LL+ G+ +
Sbjct: 179 KTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFL 238
Query: 242 IISFLGGNIATEINLNPIISKRITITGSTLRRRTDIAKQSIRDSLQLKIWPLLNSHVIAP 301
+ G T ++ + + +T+ G + + +R L+ + + + P
Sbjct: 239 TYGWASGE-WTALDEDDARRRGVTVVGLLGVQA---ERGGLRA-LEARALAEAAAGRLVP 293
Query: 302 VIHTVLPLGKVAMAHDIMEKSEHIGKIILLP 332
V+ PL + A AH +E +GK++LLP
Sbjct: 294 VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324