RPSBLAST alignment for GI: 254780290 and conserved domain: cd08246
>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393
Score = 90.6 bits (225), Expect = 5e-19
Identities = 63/218 (28%), Positives = 90/218 (41%), Gaps = 47/218 (21%)
Query: 27 PIPQPQKEEILIKVEAIGVN---------RP----DVMQRKGLYPPPKNANPILGLEVAG 73
P+P+ E+L+ V A GVN P QR+G P I G + +G
Sbjct: 36 PVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYH----IGGSDASG 91
Query: 74 KIVDLGENTTHWNIGDEV---CALVNG-------------------------GGYAEYCL 105
+ +GE +W +GDEV C++ +G G +A++ L
Sbjct: 92 IVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFAL 151
Query: 106 SHQGHTLPIPKGYNAIQAASLPESFFTVWANLF--QTANLRSGQTVLIHGGSSGIGTTAI 163
+P PK + +AA+ T + LF ++ G VLI G S G+G+ AI
Sbjct: 152 VQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAI 211
Query: 164 QLASYFGATVYTTAKSEEKCLACLKLGAKHAINYLKED 201
QLA GA SEEK C LGA+ IN D
Sbjct: 212 QLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFD 249