RPSBLAST alignment for GI: 254780290 and conserved domain: cd08248
>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350
Score = 143 bits (363), Expect = 7e-35
Identities = 103/354 (29%), Positives = 150/354 (42%), Gaps = 37/354 (10%)
Query: 7 MRHVAMSGYGKSNVM-FLAESPIPQPQKE-EILIKVEAIGVNRPDVMQRKG--------- 55
M+ + YG + + L + IP +K ++LIKV A VN DV+ R G
Sbjct: 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKK 60
Query: 56 LYPPPKNANP-----ILGLEVAGKIVDLGENTTHWNIGDEVCALVNG---GGYAEYCLSH 107
P + LG + +G +VD+G + IGDEV V G +AEY +
Sbjct: 61 RKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVP 120
Query: 108 QGHTLPIPKGYNAIQAASLPESFFTVWANLFQTANLR----SGQTVLIHGGSSGIGTTAI 163
+ PK + +AASLP + T W+ L L +G+ VLI GGS G+GT AI
Sbjct: 121 ENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAI 180
Query: 164 QLASYFGATVYTTAKSEEKCLACLKLGAKHAINYLKEDFLEILQKETQGRGIDIILDMVG 223
QL +GA V TT S + LGA I+Y EDF E L + D+ILD VG
Sbjct: 181 QLLKAWGAHVTTTC-STDAIPLVKSLGADDVIDYNNEDFEEELTERG---KFDVILDTVG 236
Query: 224 AEYLNQHLTLLSKEGKLIII--------SFLGGNIATEINLNPIISKRITITGSTLRRRT 275
+ L LL K G + + LG + + + + + +
Sbjct: 237 GDTEKWALKLLKKGGTYVTLVSPLLKNTDKLG--LVGGMLKSAVDLLKKNVKSLLKGSHY 294
Query: 276 DIAKQSIRDSLQLKIWPLLNSHVIAPVIHTVLPLGKVAMAHDIMEKSEHIGKII 329
S S ++ L+ I PVI V P +V A++ +E GK +
Sbjct: 295 RWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTV 348