RPSBLAST alignment for GI: 254780290 and conserved domain: cd08275
>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337
Score = 199 bits (508), Expect = 1e-51
Identities = 100/341 (29%), Positives = 167/341 (48%), Gaps = 20/341 (5%)
Query: 8 RHVAMSGYGKSNVMFLAESPIPQPQKEEILIKVEAIGVNRPDVMQRKGLYPPPKNANPIL 67
R V ++G+G + + + + +P+P E+ ++VEA G+N D+M R+GLY +
Sbjct: 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVP 60
Query: 68 GLEVAGKIVDLGENTTHWNIGDEVCALVNGGGYAEYCLSHQGHTLPIPKGYNAIQAASLP 127
G E AG + +GE + +GD V L GGYAE P+P G + +AA+ P
Sbjct: 61 GFECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFP 120
Query: 128 ESFFTVWANLFQTANLRSGQTVLIHGGSSGIGTTAIQLAS-YFGATVYTTAKSEEKCLAC 186
++ T + LF+ NLR GQ+VL+H + G+G A QL TV TA S K A
Sbjct: 121 VNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEAL 179
Query: 187 LKLGAKHAINYLKEDFLEILQKETQGRGIDIILDMVGAEYLNQHLTLLSKEGKLIIISF- 245
+ G H I+Y +D++E ++K + G+DI+LD +G E + LL G+L++
Sbjct: 180 KENGVTHVIDYRTQDYVEEVKKIS-PEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAA 238
Query: 246 ------------LGGNIATEINLNPI--ISKRITITGSTLRRRTDIAKQSIRDSLQLKIW 291
L ++P+ IS+ ++ G L + ++ + + K+
Sbjct: 239 NLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFE--ERELLTEVMDKLL 296
Query: 292 PLLNSHVIAPVIHTVLPLGKVAMAHDIMEKSEHIGKIILLP 332
L I P I +V P +V A ++ ++IGK++L P
Sbjct: 297 KLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337