>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

 Score = 59.0 bits (144), Expect = 2e-09
 Identities = 70/295 (23%), Positives = 109/295 (36%), Gaps = 65/295 (22%)

Query: 31  PQKEEILIKVEAIGVNRPDVMQRKGLYPPPKNANPILGLEVAGKIVDLGENTTHWNIGDE 90
           P+ +E+L+++ A G+   D++ R G  P P  A  +LG E AG +  +G   T    GD 
Sbjct: 25  PRPDEVLVRIVATGICHTDLVVRDGGLPTPLPA--VLGHEGAGVVEAVGSAVTGLKPGDH 82

Query: 91  VCALVNGGGYAEYCLSHQ----GHTLPI------PKGYNAIQAASLPE---SFF------ 131
           V       G    CLS       +  P+      P G   +           FF      
Sbjct: 83  VVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFA 142

Query: 132 -------------------TVWANL---FQT--------ANLRSGQTVLIHGGSSGIGTT 161
                               + A L    QT           R G ++ + G    +G  
Sbjct: 143 TYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLA 201

Query: 162 AIQLASYFGAT----VYTTAKSEEKCLACLKLGAKHAINYLKEDFLEILQKETQGRGIDI 217
           A+  A   G T    V       E  LA  +LGA H IN  +ED +  +++ T G G+D 
Sbjct: 202 AVMAAKIAGCTTIIAVDIVDSRLE--LA-KELGATHVINPKEEDLVAAIREIT-GGGVDY 257

Query: 218 ILDMVG-AEYLNQHLTLLSKEGKLIII--SFLGGNIATEINLNPIISKRITITGS 269
            LD  G    + Q +  L+  G L ++     G  +   +++N ++    TI G 
Sbjct: 258 ALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEV--TLDVNDLLVSGKTIRGV 310