HHsearch alignment for GI: 254780291 and conserved domain: KOG1378
>KOG1378 consensus.
Probab=98.44 E-value=4.2e-06 Score=60.13 Aligned_cols=178 Identities=16% Similarity=0.240 Sum_probs=110.9
Q ss_pred EEEEECCCEECCCHHHHHHHHHHHHCC-CEEEEEEECCCC-CCCCH-HHHHHHHHHH---CCCCCEEECCCCCCCCCC-C
Q ss_conf 155513310046314688999886116-567897605100-12126-7788888672---655751302455444788-8
Q gi|254780291|r 162 IAVIADPWYKADTPMFVEAINSLKSSK-NIILGILTGDMT-QSSTT-KELKRFYNIY---SLKFPFFRGLGSQEYIGN-R 234 (475)
Q Consensus 162 ~~~~~~pw~k~~~~~~vesinsl~~~~-~~~~gIINGDLT-eFG~q-~qL~eFr~Vw---nl~iPv~lGLGNHDYqNN-~ 234 (475)
T Consensus 150 ~~i~GDlG~~~~~----~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~ 225 (452)
T KOG1378 150 AAIFGDMGCTEPY----TSTLRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQ 225 (452)
T ss_pred EEEECCCCCCCCC----CCHHHHHHCCCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
T ss_conf 9997235643466----335768752468868998262652279985116778866434530485499636653457776
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEE-EEEEEEECCCEEEEEE
Q ss_conf 766745455000003688899999999877655566654210010013444565521037775-4433430273355540
Q gi|254780291|r 235 PCRDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISG-SQSYSWNIDNVHFIQA 313 (475)
Q Consensus 235 dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~G-SLSYSWd~gdvHfVQ~ 313 (475)
T Consensus 226 ~~-------------------------------------F~~y~~Rf~mP--~~~s~----s~~~l~YSfd~G~vhfv~l 262 (452)
T KOG1378 226 PC-------------------------------------FVPYSARFNMP--GNSSE----SDSNLYYSFDVGGVHFVVL 262 (452)
T ss_pred CC-------------------------------------CCCCCEEECCC--CCCCC----CCCCEEEEEEECCEEEEEE
T ss_conf 66-------------------------------------43321012368--87677----7773069972063899997
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCC-CCEEEEECCC---CCCC--HHHH-
Q ss_conf 3641036751675300122221000256511343205655778878888840347-9579995004---7720--0389-
Q gi|254780291|r 314 NYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQRE-GKYIILFADD---IDRF--SSID- 386 (475)
Q Consensus 314 NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~-gK~IILN~HD---~~~~--sSi~- 386 (475)
T Consensus 263 sse~~~--~~~~~-------------------------~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG 315 (452)
T KOG1378 263 STETYY--NFLKG-------------------------TAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREG 315 (452)
T ss_pred ECCCCC--CCCCC-------------------------CHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCHHHCCC
T ss_conf 241024--44443-------------------------358999999999746568973999955662206871231037
Q ss_pred --HHH--HHHHHHHHCCCCEEEEEEEECCCCC
Q ss_conf --999--9999998589617999864236765
Q gi|254780291|r 387 --QKR--MFEKFLTQSKISTIFTTRFTSSPES 414 (475)
Q Consensus 387 --~Kr--mFks~itk~nV~AIF~aH~Hqshe~ 414 (475)
T Consensus 316 ~~~~~~~~LE~lf~~~~VDvvf~GHvH~-YER 346 (452)
T KOG1378 316 EFESMREGLEPLFVKYKVDVVFWGHVHR-YER 346 (452)
T ss_pred CCCCHHHHHHHHHHHHCCEEEEEECEEC-CCC
T ss_conf 5101277899999872941999602031-010