HHsearch alignment for GI: 254780291 and conserved domain: KOG2679

Probab=97.36  E-value=0.0026  Score=41.73  Aligned_cols=214  Identities=17%  Similarity=0.218  Sum_probs=109.9

Q ss_pred             HHCCCEEEEEEECCC-CCCCCHHH-----HHHHHHHH---CCCCCEEECCCCCCCCCCCCCCCC--CCCCCCCCHHHHHH
Q ss_conf             611656789760510-01212677-----88888672---655751302455444788876674--54550000036888
Q gi|254780291|r  185 KSSKNIILGILTGDM-TQSSTTKE-----LKRFYNIY---SLKFPFFRGLGSQEYIGNRPCRDP--YTLTPSIYGCAFIA  253 (475)
Q Consensus       185 ~~~~~~~~gIINGDL-TeFG~q~q-----L~eFr~Vw---nl~iPv~lGLGNHDYqNN~dC~~P--~~~d~s~n~CA~sa  253 (475)
T Consensus        71 ge~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rs-  149 (336)
T KOG2679          71 GEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRS-  149 (336)
T ss_pred             HHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCEECCCH-
T ss_conf             7752640899638731006878777804776542403482103443322057655675222020878750634443507-


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCH-HHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCHHHH
Q ss_conf             999999998776555666542100-1001344456552103777544334302733555403641036751675300122
Q gi|254780291|r  254 INDISQQINDHYPQIKSIKEFNGD-SQRYRNRSWHGETYSISISGSQSYSWNIDNVHFIQANYSMFHSVYFNDEWSNIFT  332 (475)
Q Consensus       254 v~~M~s~I~dy~~q~s~i~efN~D-s~~y~~~~~~~~~~~vei~GSLSYSWd~gdvHfVQ~NYpsy~~V~~n~~~~~af~  332 (475)
T Consensus       150 ------f~~~a-----e~ve~f~v~~~~f~~d-----------~~~~------~~~~~----------ydw~~v~PR---  188 (336)
T KOG2679         150 ------FYVDA-----EIVEMFFVDTTPFMDD-----------TFTL------CTDDV----------YDWRGVLPR---  188 (336)
T ss_pred             ------HHHCC-----EEEEEECCCCCCCHHH-----------HEEC------CCCCC----------CCCCCCCHH---
T ss_conf             ------76200-----0133311124412011-----------0102------55232----------234467808---


Q ss_pred             HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCC-CCCCHHH----HHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             2210002565113432056557788788888403479579995004-7720038----9999999999858961799986
Q gi|254780291|r  333 VAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKYIILFADD-IDRFSSI----DQKRMFEKFLTQSKISTIFTTR  407 (475)
Q Consensus       333 Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~IILN~HD-~~~~sSi----~~KrmFks~itk~nV~AIF~aH  407 (475)
T Consensus       189 ~~~~~~---------------~l~~le~~L~~S~a~--wkiVvGHh~i~S~~~HG~T~eL~~~LlPiL~~n~VdlY~nGH  251 (336)
T KOG2679         189 VKYLRA---------------LLSWLEVALKASRAK--WKIVVGHHPIKSAGHHGPTKELEKQLLPILEANGVDLYINGH  251 (336)
T ss_pred             HHHHHH---------------HHHHHHHHHHHHHCC--EEEEECCCCEEHHHCCCCHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf             899999---------------999999999874325--699942551001101598499999888899863975797565


Q ss_pred             EE-CCCCCCCCCCC----------------------CCEEEEEEECCCCCCCEEEEEECCCEEEEEEEECCCCCHHH
Q ss_conf             42-36765246555----------------------31013897045646718999964885999998516763678
Q gi|254780291|r  408 FT-SSPESYIKDST----------------------GRPVRVYNINKNSKNEFILLEMTPHYINVTAYERRGKVPHI  461 (475)
Q Consensus       408 ~H-qshe~~lec~~----------------------GykVPvy~iGSvpkNrF~~lem~~~~atITgY~~Rd~tPhi  461 (475)
T Consensus       252 DHcLQhis~~e~~iqf~tSGagSkaw~g~~~~~~~~p~~lkF~Ydgq----Gfmsv~is~~e~~vvfyD~~G~~Lhk  324 (336)
T KOG2679         252 DHCLQHISSPESGIQFVTSGAGSKAWRGTDHNPEVNPKELKFYYDGQ----GFMSVEISHSEARVVFYDVSGKVLHK  324 (336)
T ss_pred             HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHEEEEECCC----CEEEEEEECCEEEEEEEECCCCEEEE
T ss_conf             45665215777770589407755456777657765810427862897----26999984135699999546856887