HHsearch alignment of GI: 254780291 and MMDB domain: 2yvt_A_
>2yvt_A (A:) Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national project on protein structural and functional analyses; 1.60A {Aquifex aeolicus VF5}
Probab=98.43 E-value=7.7e-06 Score=57.94 Aligned_cols=215 Identities=9% Similarity=0.016 Sum_probs=122.2
Q ss_pred CEEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHH---------------------------H
Q ss_conf 5155513310046314688999886116567897605100121267788888---------------------------6
Q gi|254780291|r 161 GIAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSSTTKELKRFY---------------------------N 213 (475)
Q Consensus 161 ~~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q~qL~eFr---------------------------~ 213 (475)
-|++++|.-+..+ ..+.+-...+..+.-+=++.|||++.+...+..... .
T Consensus 7 ri~~iSDlH~~~~---~~~~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (260)
T 2yvt_A 7 KVLAIKNFKERFD---LLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFR 83 (260)
T ss_dssp EEEEEECCTTCGG---GHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCHH---HHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 7999972899989---9999999876649999999566689987898999999987655102331101113677899998
Q ss_pred HH-CCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCC
Q ss_conf 72-655751302455444788-8766745455000003688899999999877655566654210010013444565521
Q gi|254780291|r 214 IY-SLKFPFFRGLGSQEYIGN-RPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETY 291 (475)
Q Consensus 214 Vw-nl~iPv~lGLGNHDYqNN-~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~ 291 (475)
.. ..+.|++.=.||||+..+ .... ... ..........
T Consensus 84 ~~~~~~~~~~~~~GNhd~~~~~~~~~-------------------------~~~------~~~~~~~~~~---------- 122 (260)
T 2yvt_A 84 EIGELGVKTFVVPGKNDAPLKIFLRA-------------------------AYE------AETAYPNIRV---------- 122 (260)
T ss_dssp HHHTTCSEEEEECCTTSCCHHHHHHH-------------------------HHH------TTTTCTTEEE----------
T ss_pred HHHHCCCCEEEEECCCCHHHHHHHHH-------------------------HHH------HHCCCCCCCC----------
T ss_conf 88753985899947883255566777-------------------------642------3113453201----------
Q ss_pred EEEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCE
Q ss_conf 03777544334302733555403641036751675300122221000256511343205655778878888840347957
Q gi|254780291|r 292 SISISGSQSYSWNIDNVHFIQANYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKY 371 (475)
Q Consensus 292 ~vei~GSLSYSWd~gdvHfVQ~NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~ 371 (475)
..-.+....+...++...... .. .... ....-.......+||++.+.+... +.
T Consensus 123 -----~~~~~~~~~~~~~~~~~~~~~-~~----~~~~---------------~~~~~~~~~~~~~~l~~~l~~~~~--~~ 175 (260)
T 2yvt_A 123 -----LHEGFAGWRGEFEVIGFGGLL-TE----HEFE---------------EDFVLKYPRWYVEYILKFVNELKP--RR 175 (260)
T ss_dssp -----CSSEEEEETTTEEEEEECSEE-ES----SCCB---------------SSSSCEEEHHHHHHHGGGGGGSCC--CE
T ss_pred -----CCCEEEEECCCEEEEEECCCC-CC----CCCC---------------CHHHHHHHHHHHHHHHHHHHHCCC--CC
T ss_conf -----243369953988999946767-76----5444---------------033333456789998764310145--65
Q ss_pred EEEECCCCCCC---------HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEE
Q ss_conf 99950047720---------038999999999985896179998642367652465553101389704564671899996
Q gi|254780291|r 372 IILFADDIDRF---------SSIDQKRMFEKFLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNSKNEFILLEM 442 (475)
Q Consensus 372 IILN~HD~~~~---------sSi~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvpkNrF~~lem 442 (475)
+|+-+|..+-. .....-..+..++...++..+|.||.|....+ .+..++++.|+...+.|..+++
T Consensus 176 ~iv~~hh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~i~GH~H~~~~~------~~~~~~v~~Gs~~~~~~~~~~~ 249 (260)
T 2yvt_A 176 LVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHEL------VGNTIVVNPGEFEEGRYAFLDL 249 (260)
T ss_dssp EEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEEEE------ETTEEEEECCBGGGTEEEEEET
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCEEE------ECCEEEEECCCCCCCEEEEEEE
T ss_conf 3899850235665444443220112057888764029819999603077787------1998999836053585999998
Q ss_pred CCCEEEEEEE
Q ss_conf 4885999998
Q gi|254780291|r 443 TPHYINVTAY 452 (475)
Q Consensus 443 ~~~~atITgY 452 (475)
.+..+.|.-|
T Consensus 250 ~~~~~~i~~~ 259 (260)
T 2yvt_A 250 TQHKIKLEQF 259 (260)
T ss_dssp TTTEEEEEEC
T ss_pred CCCEEEEEEC
T ss_conf 1997999976