Query gi|254780291|ref|YP_003064704.1| hypothetical protein CLIBASIA_00880 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 475
No_of_seqs 13 out of 15
Neff 2.2
Searched_HMMs 33803
Date Tue May 24 16:45:29 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780291.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1ute_A Protein (II purple aci 99.0 6.9E-09 2.1E-13 78.0 10.8 237 162-458 9-294 (313)
2 >1uf3_A Hypothetical protein T 98.9 7.4E-08 2.2E-12 71.3 13.8 218 162-452 8-227 (228)
3 >2nxf_A Putative dimetal phosp 98.7 1.5E-09 4.5E-14 82.4 0.5 161 196-433 1-170 (172)
4 >2qfp_A Purple acid phosphatas 98.7 7.6E-07 2.2E-11 64.6 12.4 232 162-462 8-293 (310)
5 >1xzw_A Purple acid phosphatas 98.6 1.4E-06 4.2E-11 62.8 11.8 233 162-462 8-293 (305)
6 >3ib7_A ICC protein; metalloph 98.5 1.8E-06 5.4E-11 62.1 10.1 215 162-458 6-260 (262)
7 >2yvt_A Hypothetical protein A 98.4 7.7E-06 2.3E-10 57.9 12.4 215 161-452 7-259 (260)
8 >1ii7_A MRE11 nuclease; RAD50, 98.2 1.5E-06 4.5E-11 62.6 4.6 192 162-415 3-214 (333)
9 >2q8u_A Exonuclease, putative; 98.0 1E-05 3E-10 57.2 5.8 202 177-446 49-270 (281)
10 >3d03_A Phosphohydrolase; glyc 97.9 3E-05 8.8E-10 54.1 6.6 72 162-233 3-86 (149)
11 >3d03_A Phosphohydrolase; glyc 97.5 0.00023 6.7E-09 48.3 5.5 107 297-433 5-118 (125)
12 >1t71_A Phosphatase, conserved 96.4 0.046 1.4E-06 33.0 9.5 71 162-233 7-77 (281)
13 >2nxf_A Putative dimetal phosp 94.3 0.046 1.3E-06 33.1 3.7 65 170-234 32-103 (150)
14 >2a22_A Vacuolar protein sorti 91.2 0.19 5.6E-06 29.0 3.2 68 162-235 28-95 (215)
15 >1xm7_A Hypothetical protein A 89.8 0.56 1.7E-05 25.9 4.6 46 185-232 39-85 (195)
16 >2kkn_A Uncharacterized protei 88.2 1.8 5.2E-05 22.6 6.2 62 387-453 116-177 (178)
17 >3ck2_A Conserved uncharacteri 87.5 1.8 5.4E-05 22.5 6.0 71 390-465 96-173 (176)
18 >1z2w_A Vacuolar protein sorti 84.1 0.99 2.9E-05 24.2 3.2 67 161-233 12-78 (192)
19 >3gve_A YFKN protein; alpha-be 62.0 10 0.0003 17.5 8.7 236 172-454 38-308 (341)
20 >1zzo_A RV1677; thioredoxin fo 54.2 12 0.00036 17.1 3.0 101 363-465 19-133 (136)
21 >1nnw_A Hypothetical protein; 47.1 18 0.00053 16.0 6.8 69 162-232 4-77 (225)
22 >1w9c_A CRM1 protein, exportin 41.7 6.6 0.00019 18.8 0.1 55 208-268 60-116 (156)
23 >3gjx_A Exportin-1; transport, 38.4 5.8 0.00017 19.2 -0.6 36 228-268 20-56 (142)
24 >1hp1_A 5'-nucleotidase; metal 30.4 32 0.00095 14.3 10.8 62 173-234 30-98 (327)
25 >1lu4_A Soluble secreted antig 30.4 32 0.00095 14.3 4.9 104 363-466 18-132 (136)
26 >1x8h_A Beta-lactamase; hydrol 29.8 26 0.00078 14.8 1.6 32 398-429 59-90 (128)
27 >1ycg_A Nitric oxide reductase 27.4 21 0.00063 15.4 0.8 58 369-429 44-104 (127)
28 >1ak0_A P1 nuclease; endonucle 25.2 40 0.0012 13.7 3.4 133 233-369 69-220 (270)
29 >2zo4_A Metallo-beta-lactamase 24.3 31 0.00091 14.4 1.1 48 385-432 43-95 (151)
30 >3g1p_A Protein PHNP; C-P lyas 24.1 24 0.00072 15.1 0.6 35 397-431 66-103 (137)
31 >1jni_A NAPB;, diheme cytochro 23.4 13 0.00038 16.9 -1.0 26 138-163 40-66 (123)
32 >1s3l_A Hypothetical protein M 22.8 44 0.0013 13.4 6.8 63 160-231 26-88 (190)
33 >2q9u_A A-type flavoprotein; f 22.2 42 0.0013 13.5 1.5 44 386-429 64-109 (132)
34 >1l0q_A Surface layer protein; 21.9 34 0.001 14.1 1.0 16 297-312 31-46 (90)
35 >1ogy_B Diheme cytochrome C NA 21.8 17 0.0005 16.1 -0.6 26 138-163 41-67 (130)
36 >1m2x_A Class B carbapenemase 20.8 48 0.0014 13.1 2.1 34 396-429 61-94 (114)
37 >2fhx_A SPM-1; metallo-beta-la 20.6 26 0.00076 14.9 0.1 46 384-429 51-98 (143)
38 >1vme_A Flavoprotein; TM0755, 20.5 26 0.00077 14.9 0.1 61 366-429 58-122 (142)
39 >2rgy_A Transcriptional regula 20.2 50 0.0015 13.0 2.2 88 357-446 26-113 (132)
No 1
>>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase, metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} (A:)
Probab=98.99 E-value=6.9e-09 Score=78.03 Aligned_cols=237 Identities=14% Similarity=0.111 Sum_probs=141.0
Q ss_pred EEEEECCCEEC-------CCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHH------HHHHHHHH----CCCCCEEEC
Q ss_conf 15551331004-------63146889998861165678976051001212677------88888672----655751302
Q gi|254780291|r 162 IAVIADPWYKA-------DTPMFVEAINSLKSSKNIILGILTGDMTQSSTTKE------LKRFYNIY----SLKFPFFRG 224 (475)
Q Consensus 162 ~~~~~~pw~k~-------~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q~q------L~eFr~Vw----nl~iPv~lG 224 (475)
|++++|.-+-. ...-..+.+....+..+..|-++.|||++-+.... .+.+...- .++.|++.+
T Consensus 9 i~~~sD~H~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~vi~~GDi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (313)
T 1ute_A 9 FVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVL 88 (313)
T ss_dssp EEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCEEEC
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 99996589998754430779999999999975079979998998877578886406899999999861100147646987
Q ss_pred CCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEE
Q ss_conf 455444788-8766745455000003688899999999877655566654210010013444565521037775443343
Q gi|254780291|r 225 LGSQEYIGN-RPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSW 303 (475)
Q Consensus 225 LGNHDYqNN-~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSW 303 (475)
.||||+.++ ..+.. +. ... ........+. .........+...|+.
T Consensus 89 ~gnhd~~~~~~~~~~---------------------~~-~~~-------~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 134 (313)
T 1ute_A 89 AGNHDHLGNVSAQIA---------------------YS-KIS-------KRWNFPSPYY-----RLRFKIPRSNVSVAIF 134 (313)
T ss_dssp CCHHHHHSCHHHHHH---------------------GG-GTS-------TTEECCSSSE-----EEEEECTTSSCEEEEE
T ss_pred ECCCCCCCCCCCCCC---------------------HH-CCC-------CCCCCCCCCC-----EEEECCCCCCCCEEEE
T ss_conf 405510366412103---------------------00-026-------4554899874-----0364367889616999
Q ss_pred ECCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCC--
Q ss_conf 027335554036410367516753001222210002565113432056557788788888403479579995004772--
Q gi|254780291|r 304 NIDNVHFIQANYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKYIILFADDIDR-- 381 (475)
Q Consensus 304 d~gdvHfVQ~NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~IILN~HD~~~-- 381 (475)
+.+.++|+.++...+...... ........+--+||+++|.. ..++.+|+.+|...-
T Consensus 135 ~~~~~~~~~l~~~~~~~~~~~--------------------~~~~~~~~~q~~wl~~~l~~--~~~~~~iv~~H~p~~~~ 192 (313)
T 1ute_A 135 MLDTVTLCGNSDDFVSQQPER--------------------PRNLALARTQLAWIKKQLAA--AKEDYVLVAGHYPVWSI 192 (313)
T ss_dssp ECCHHHHHCCGGGSTTCSCCS--------------------CSCHHHHHHHHHHHHHHHHH--CCCSEEEEECSSCSSCC
T ss_pred EECCEEEEECCCCCCCCCCCC--------------------CCCCCHHHHHHHHHHHHHHC--CCCCCEEEEECCCCCCC
T ss_conf 824366771357643322246--------------------54510499999999999960--85677799825665445
Q ss_pred ---CHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECC--------------------------C
Q ss_conf ---00389999999999858961799986423676524655531013897045--------------------------6
Q gi|254780291|r 382 ---FSSIDQKRMFEKFLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINK--------------------------N 432 (475)
Q Consensus 382 ---~sSi~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGS--------------------------v 432 (475)
.........|...+.+++|.++|.||.|...... ....++++..|+ .
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~v~~~l~GH~H~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (313)
T 1ute_A 193 AEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQ----DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAEN 268 (313)
T ss_dssp SSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEE----CTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTT
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEEE----CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCC
T ss_conf 5555658888868999987496299966774246872----599866999798877788755566688543314451578
Q ss_pred CCCCEEEEEECCCEEEEEEEECCCCC
Q ss_conf 46718999964885999998516763
Q gi|254780291|r 433 SKNEFILLEMTPHYINVTAYERRGKV 458 (475)
Q Consensus 433 pkNrF~~lem~~~~atITgY~~Rd~t 458 (475)
....|..+++++..++++.+..-+..
T Consensus 269 ~~~~~~~i~v~~~~~~~~~~~~~~~~ 294 (313)
T 1ute_A 269 SLGGFAYVEITPKEMSVTYIEASGKS 294 (313)
T ss_dssp SCCEEEEEEECSSCEEEEEEETTSCE
T ss_pred CCCEEEEEEEECCEEEEEEECCCCCE
T ss_conf 87649999998999999999099979
No 2
>>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} (A:)
Probab=98.91 E-value=7.4e-08 Score=71.26 Aligned_cols=218 Identities=8% Similarity=0.045 Sum_probs=130.2
Q ss_pred EEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCH-HHHHHHHHHH-CCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 15551331004631468899988611656789760510012126-7788888672-655751302455444788876674
Q gi|254780291|r 162 IAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSSTT-KELKRFYNIY-SLKFPFFRGLGSQEYIGNRPCRDP 239 (475)
Q Consensus 162 ~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q-~qL~eFr~Vw-nl~iPv~lGLGNHDYqNN~dC~~P 239 (475)
|+++.|.-...+ ..+.+-...+..+..+-|+.||+.+.|.. .++.+|-..+ ++++|++.=.||||+.....
T Consensus 8 i~~isD~H~~~~---~~~~~~~~~~~~~~d~vi~~GDl~d~~~~~~~~~~~~~~l~~~~~pv~~i~GNHD~~~~~~---- 80 (228)
T 1uf3_A 8 ILATSNPXGDLE---ALEKFVKLAPDTGADAIALIGNLXPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEY---- 80 (228)
T ss_dssp EEEEECCTTCHH---HHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSCSHHHH----
T ss_pred EEEEECCCCCHH---HHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC----
T ss_conf 999956878999---9999999877709999998998898876525888753000011516999967888732110----
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEECCCCEE
Q ss_conf 54550000036888999999998776555666542100100134445655210377754433430273355540364103
Q gi|254780291|r 240 YTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWNIDNVHFIQANYSMFH 319 (475)
Q Consensus 240 ~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd~gdvHfVQ~NYpsy~ 319 (475)
........ .... .....-..+.+..+...++..+...+.
T Consensus 81 --------------------~~~~~~~~----------~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (228)
T 1uf3_A 81 --------------------LREAANVE----------LVHP-----------EXRNVHETFTFWRGPYLVAGVGGEIAD 119 (228)
T ss_dssp --------------------HHHHHHHH----------HHCT-----------TEEECBTSEEEETTTEEEEEECSEEES
T ss_pred --------------------HHCCCCCC----------CCCC-----------CCCCCCEEEEEECCCCEEECCCCCCCC
T ss_conf --------------------01013443----------3345-----------321122045650477047412223456
Q ss_pred EEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 67516753001222210002565113432056557788788888403479579995004772003899999999998589
Q gi|254780291|r 320 SVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKYIILFADDIDRFSSIDQKRMFEKFLTQSK 399 (475)
Q Consensus 320 ~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~IILN~HD~~~~sSi~~KrmFks~itk~n 399 (475)
.......+. .........|++..+..+......++.................+.+++.+++
T Consensus 120 ~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (228)
T 1uf3_A 120 EGEPEEHEA-------------------LRYPAWVAEYRLKALWELKDYPKIFLFHTXPYHKGLNEQGSHEVAHLIKTHN 180 (228)
T ss_dssp SSCCBSSSS-------------------CEEEHHHHHHHHGGGGGSCSCCEEEEESSCBCBTTTBTTSBHHHHHHHHHHC
T ss_pred CCCCCHHHH-------------------HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCC
T ss_conf 776521221-------------------1125788999999976401667348996410475322325798987642259
Q ss_pred CCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCEEEEEEE
Q ss_conf 61799986423676524655531013897045646718999964885999998
Q gi|254780291|r 400 ISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNSKNEFILLEMTPHYINVTAY 452 (475)
Q Consensus 400 V~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvpkNrF~~lem~~~~atITgY 452 (475)
+..||.||.|+.... ...+.+++.||+..+.|..+++++..+++.-+
T Consensus 181 ~~~vi~GH~H~~~~~------~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~~~~ 227 (228)
T 1uf3_A 181 PLLVLVAGKGQKHEX------LGASWVVVPGDLSEGEYSLLDLRARKLETGNV 227 (228)
T ss_dssp CSEEEECCSSCEEEE------ETTEEEEECCBGGGTEEEEEETTTTEEEEEEC
T ss_pred CCEEEECCCCCCEEE------ECCEEEEECCCCCCCCEEEEECCCCEEEEEEE
T ss_conf 868998676666157------09849997885546855999856998997763
No 3
>>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} (A:118-289)
Probab=98.74 E-value=1.5e-09 Score=82.36 Aligned_cols=161 Identities=7% Similarity=-0.029 Sum_probs=106.2
Q ss_pred ECCCCCCCCHHHHHHHHHHH-CCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 05100121267788888672-655751302455444788-8766745455000003688899999999877655566654
Q gi|254780291|r 196 TGDMTQSSTTKELKRFYNIY-SLKFPFFRGLGSQEYIGN-RPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKE 273 (475)
Q Consensus 196 NGDLTeFG~q~qL~eFr~Vw-nl~iPv~lGLGNHDYqNN-~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~e 273 (475)
+|||++.|..+|..+++.+- ++++|++.-.||||+... ..=. -.+-..++
T Consensus 1 TGDl~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD~~~~~~~~~--------------------~~~~~~~~-------- 52 (172)
T 2nxf_A 1 TGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEES--------------------EKHTHSWR-------- 52 (172)
T ss_dssp -----CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTS--------------------HHHHHHHH--------
T ss_pred HCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCC--------------------CCCCCCHH--------
T ss_conf 22334322257777511454079739999547432344676554--------------------11001011--------
Q ss_pred HCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf 21001001344456552103777544334302733555403641036751675300122221000256511343205655
Q gi|254780291|r 274 FNGDSQRYRNRSWHGETYSISISGSQSYSWNIDNVHFIQANYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSE 353 (475)
Q Consensus 274 fN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd~gdvHfVQ~NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~ 353 (475)
.. ..++..|++..++++|+.++-..+.. .+ ++ ..+
T Consensus 53 ------~~-------------~~~~~~~~~~~~~~~~~~~~s~~~~~----~~-----------~~-----------~~~ 87 (172)
T 2nxf_A 53 ------IL-------------TQHNHNLQDLNLPPVSVGLEQRFVKF----NG-----------GF-----------SEQ 87 (172)
T ss_dssp ------HH-------------HHHCCCTTCTTSCSCSSSGGGGCSTT----CC-----------BC-----------CHH
T ss_pred ------HC-------------CCCCCCCCEECCCCCCCCCCCCCCCC----CC-----------CC-----------CHH
T ss_conf ------01-------------02466721003554324555555545----55-----------56-----------689
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCC------HHHHHHHHHHHHHHHC-CCCEEEEEEEECCCCCCCCCCCCCEEEE
Q ss_conf 77887888884034795799950047720------0389999999999858-9617999864236765246555310138
Q gi|254780291|r 354 ISQWIRDDVFQAQREGKYIILFADDIDRF------SSIDQKRMFEKFLTQS-KISTIFTTRFTSSPESYIKDSTGRPVRV 426 (475)
Q Consensus 354 iskWL~~DL~~A~~~gK~IILN~HD~~~~------sSi~~KrmFks~itk~-nV~AIF~aH~Hqshe~~lec~~GykVPv 426 (475)
-.+||++.|..+++.+..+|+.+|..... ........|..++.++ +|.++|.||.|.-.- +.....+++
T Consensus 88 q~~wl~~~L~~~~~~~~~~iv~~h~p~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~GH~H~~~~----~~~~~g~~~ 163 (172)
T 2nxf_A 88 QLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGR----CTDSSGAQH 163 (172)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEESSCCCTTSSCGGGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEE----EECTTSCEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCE----EECCCCCEE
T ss_conf 9999999999647439608999875886668887511463999999998689926999676478863----545699659
Q ss_pred EEECCCC
Q ss_conf 9704564
Q gi|254780291|r 427 YNINKNS 433 (475)
Q Consensus 427 y~iGSvp 433 (475)
+..||..
T Consensus 164 ~~~gs~~ 170 (172)
T 2nxf_A 164 ITLEGVI 170 (172)
T ss_dssp EECCCGG
T ss_pred EECCEEC
T ss_conf 9788551
No 4
>>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} (A:115-424)
Probab=98.67 E-value=7.6e-07 Score=64.59 Aligned_cols=232 Identities=13% Similarity=0.117 Sum_probs=131.5
Q ss_pred EEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC-----HHHHHHHHHHH---CCCCCEEECCCCCCCCCC
Q ss_conf 1555133100463146889998861165678976051001212-----67788888672---655751302455444788
Q gi|254780291|r 162 IAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSST-----TKELKRFYNIY---SLKFPFFRGLGSQEYIGN 233 (475)
Q Consensus 162 ~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~-----q~qL~eFr~Vw---nl~iPv~lGLGNHDYqNN 233 (475)
|++++|.-+..+ ...+.+.......+..|-|+.|||++.|. +.++++|.+.. ..++|+|.-+|||||.+.
T Consensus 8 i~~isD~H~~~~--~~~~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~v~GNHD~~~~ 85 (310)
T 2qfp_A 8 FGLIGDLGQSFD--SNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFA 85 (310)
T ss_dssp EEEECSCTTBHH--HHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCB
T ss_pred EEEECCCCCCCC--HHHHHHHHHHCCCCCCEEEEECCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 899744345764--056788897555688779993215015888542105678899888888713876993676521357
Q ss_pred -CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEE
Q ss_conf -8766745455000003688899999999877655566654210010013444565521037775443343027335554
Q gi|254780291|r 234 -RPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWNIDNVHFIQ 312 (475)
Q Consensus 234 -~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd~gdvHfVQ 312 (475)
.... .... ... . ... ......... .+...+....+..++..
T Consensus 86 ~~~~~-~~~~------~~~---------~-~~~------~~~~~~~~~---------------~~~~~~~~~~~~~~~~~ 127 (310)
T 2qfp_A 86 PEINE-TEPF------KPF---------S-YRY------HVPYEASQS---------------TSPFWYSIKRASAHIIV 127 (310)
T ss_dssp GGGTB-CSTT------HHH---------H-HHC------CCCGGGGTC---------------SSTTSEEEEETTEEEEE
T ss_pred CCCCC-CCCC------CCH---------H-HHC------CCCCCCCCC---------------CCCCEEEEEECCEEEEE
T ss_conf 66554-3355------422---------3-323------454567788---------------87622887448888998
Q ss_pred ECCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCC-CCEEEEECCCCCC-------CHH
Q ss_conf 03641036751675300122221000256511343205655778878888840347-9579995004772-------003
Q gi|254780291|r 313 ANYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQRE-GKYIILFADDIDR-------FSS 384 (475)
Q Consensus 313 ~NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~-gK~IILN~HD~~~-------~sS 384 (475)
........ ...+-.+||++.|..+... .+++|+..|.-.. ...
T Consensus 128 ~~~~~~~~-----------------------------~~~~q~~wl~~~l~~~~~~~~~~~i~~~H~p~~~~~~~~~~~~ 178 (310)
T 2qfp_A 128 LSSYSAYG-----------------------------RGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEG 178 (310)
T ss_dssp CCTTSCCS-----------------------------TTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTT
T ss_pred ECCCCCCC-----------------------------CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 34755777-----------------------------7529999999999875513688699951766411477787654
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC-------------CC---------------CCEE--------EEEE
Q ss_conf 8999999999985896179998642367652465-------------55---------------3101--------3897
Q gi|254780291|r 385 IDQKRMFEKFLTQSKISTIFTTRFTSSPESYIKD-------------ST---------------GRPV--------RVYN 428 (475)
Q Consensus 385 i~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec-------------~~---------------GykV--------Pvy~ 428 (475)
......+...+.++++..+|.+|-|.-....... .. +++. +.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~hgH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
T 2qfp_A 179 EAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYS 258 (310)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCCTTE
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEE
T ss_conf 67899999999975955999825631575103447742235875555479998799997547586644545578898746
Q ss_pred ECCCCCCCEEEEEECC-CEEEEEEEECCCCCHHHH
Q ss_conf 0456467189999648-859999985167636787
Q gi|254780291|r 429 INKNSKNEFILLEMTP-HYINVTAYERRGKVPHIT 462 (475)
Q Consensus 429 iGSvpkNrF~~lem~~-~~atITgY~~Rd~tPhi~ 462 (475)
........|..+++.. ...+++.|...++.+...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (310)
T 2qfp_A 259 AFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEA 293 (310)
T ss_dssp EEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCS
T ss_pred EEEECCCCEEEEEEECCCEEEEEEEECCCCCEEEE
T ss_conf 89826699899999848869999998899988750
No 5
>>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} (A:122-426)
Probab=98.58 E-value=1.4e-06 Score=62.82 Aligned_cols=233 Identities=12% Similarity=0.100 Sum_probs=134.3
Q ss_pred EEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC-----HHHHHHHHHHH-C--CCCCEEECCCCCCCCCC
Q ss_conf 1555133100463146889998861165678976051001212-----67788888672-6--55751302455444788
Q gi|254780291|r 162 IAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSST-----TKELKRFYNIY-S--LKFPFFRGLGSQEYIGN 233 (475)
Q Consensus 162 ~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~-----q~qL~eFr~Vw-n--l~iPv~lGLGNHDYqNN 233 (475)
|++|+|.-+..+ ..-..+..+....+..|-|+.|||++.|. +.+++++.+.. . -++|++.=.||||+.+.
T Consensus 8 i~~isD~H~~~~--~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~~iP~~~i~GNHD~~~~ 85 (305)
T 1xzw_A 8 FGLIGDIGQTHD--SNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYA 85 (305)
T ss_dssp EEEECSCTTBHH--HHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCB
T ss_pred EEEECCCCCCCH--HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC
T ss_conf 998613564650--468999998637786389633324456886431103456788877677613855984376433456
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEE
Q ss_conf 87667454550000036888999999998776555666542100100134445655210377754433430273355540
Q gi|254780291|r 234 RPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWNIDNVHFIQA 313 (475)
Q Consensus 234 ~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd~gdvHfVQ~ 313 (475)
...... ..+... .... ....... ...+...+.-..+...++..
T Consensus 86 ~~~~~~-------~~~~~~--------~~~~---------~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~ 128 (305)
T 1xzw_A 86 PDIGEY-------QPFVPF--------TNRY---------PTPHEAS-------------GSGDPLWYAIKRASAHIIVL 128 (305)
T ss_dssp GGGTBC-------STTHHH--------HHHS---------CCCCGGG-------------TCSSTTSEEEEETTEEEEEC
T ss_pred CCCCCC-------CCCCCH--------HHCC---------CCCCCCC-------------CCCCCCEEEEEECCEEEEEE
T ss_conf 665544-------446556--------6709---------6533456-------------78888669998264899997
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCC-CCEEEEECCCCCC-------CHHH
Q ss_conf 3641036751675300122221000256511343205655778878888840347-9579995004772-------0038
Q gi|254780291|r 314 NYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQRE-GKYIILFADDIDR-------FSSI 385 (475)
Q Consensus 314 NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~-gK~IILN~HD~~~-------~sSi 385 (475)
....... ...+-.+||++.|..+.+. ...+++..|.-.. ....
T Consensus 129 ~~~~~~~-----------------------------~~~~q~~~l~~~l~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~ 179 (305)
T 1xzw_A 129 SSYSGFV-----------------------------KYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGE 179 (305)
T ss_dssp CTTSCCS-----------------------------TTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTH
T ss_pred ECCCCCC-----------------------------CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCH
T ss_conf 4245765-----------------------------43288999999998744248986999937886446767766777
Q ss_pred HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC-------------CCEEEEE-EECC--------------------
Q ss_conf 99999999998589617999864236765246555-------------3101389-7045--------------------
Q gi|254780291|r 386 DQKRMFEKFLTQSKISTIFTTRFTSSPESYIKDST-------------GRPVRVY-NINK-------------------- 431 (475)
Q Consensus 386 ~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~~-------------GykVPvy-~iGS-------------------- 431 (475)
.....+...+.++++..+|.+|.|.-......... ..+.+++ ..|.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~gH~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (305)
T 1xzw_A 180 AMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSA 259 (305)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTCCCCCBCSSCCTTEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEE
T ss_conf 89999999999709769997884664764202177422346775443699988899983586777655334688977038
Q ss_pred --CCCCCEEEEEEC-CCEEEEEEEECCCCCHHHH
Q ss_conf --646718999964-8859999985167636787
Q gi|254780291|r 432 --NSKNEFILLEMT-PHYINVTAYERRGKVPHIT 462 (475)
Q Consensus 432 --vpkNrF~~lem~-~~~atITgY~~Rd~tPhi~ 462 (475)
.....|..+++. +...+++-|...++.+.+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (305)
T 1xzw_A 260 FREASFGHGIFDIKNRTHAHFSWHRNQDGASVEA 293 (305)
T ss_dssp EEECCCEEEEEEECSSSEEEEEEEETTSCTTCCS
T ss_pred EECCCCCEEEEEEECCCEEEEEEEECCCCCEEEE
T ss_conf 9816797899999848869999998689987875
No 6
>>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, hydrolase; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A (A:23-284)
Probab=98.48 E-value=1.8e-06 Score=62.06 Aligned_cols=215 Identities=11% Similarity=0.136 Sum_probs=124.4
Q ss_pred EEEEECCCEECCC------HHHHHH----HHHHHH-CCCEEEEEEECCCCCCCCHHHHHHHHHHH-----CCCCCEEECC
Q ss_conf 1555133100463------146889----998861-16567897605100121267788888672-----6557513024
Q gi|254780291|r 162 IAVIADPWYKADT------PMFVEA----INSLKS-SKNIILGILTGDMTQSSTTKELKRFYNIY-----SLKFPFFRGL 225 (475)
Q Consensus 162 ~~~~~~pw~k~~~------~~~ves----insl~~-~~~~~~gIINGDLTeFG~q~qL~eFr~Vw-----nl~iPv~lGL 225 (475)
|++++|.-+-.+. ..+.+. +..+.+ ..++.|=++.||+++.|...+...+.... ..++|++.=.
T Consensus 6 il~isD~H~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~ 85 (262)
T 3ib7_A 6 LLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVM 85 (262)
T ss_dssp EEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEEECC
T ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 99977787089876313674999999999999984499998999897788899999999999986555532598589979
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEEC
Q ss_conf 55444788876674545500000368889999999987765556665421001001344456552103777544334302
Q gi|254780291|r 226 GSQEYIGNRPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWNI 305 (475)
Q Consensus 226 GNHDYqNN~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd~ 305 (475)
||||+..... .+... +. ...+...+....
T Consensus 86 GNHD~~~~~~-----------------------~~~~~----------~~------------------~~~~~~~~~~~~ 114 (262)
T 3ib7_A 86 GNHDDRAELR-----------------------KFLLD----------EA------------------PSMAPLDRVCMI 114 (262)
T ss_dssp CTTSCHHHHH-----------------------HHHHC----------CC------------------CCCSCCCEEEEE
T ss_pred CCCCCHHHHH-----------------------HHCCC----------CC------------------CCCCCCCEEEEE
T ss_conf 8655455554-----------------------31013----------46------------------656775125870
Q ss_pred CCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCC-CCCC--
Q ss_conf 7335554036410367516753001222210002565113432056557788788888403479579995004-7720--
Q gi|254780291|r 306 DNVHFIQANYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKYIILFADD-IDRF-- 382 (475)
Q Consensus 306 gdvHfVQ~NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~IILN~HD-~~~~-- 382 (475)
+...++-.++..+.... -.....-.+|++.++..+......+++ .|. ....
T Consensus 115 ~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~-~h~~~~~~~~ 168 (262)
T 3ib7_A 115 DGLRIIVLDTSVPGHHH-------------------------GEIRASQLGWLAEELATPAPDGTILAL-HHPPIPSVLD 168 (262)
T ss_dssp TTEEEEECCCCCTTCCS-------------------------BCCCHHHHHHHHHHTTSCCTTCEEEEC-SSCSSCCSSG
T ss_pred CCCCEEECCCCCCCCCC-------------------------CCCCHHHHHHHHHHHHHHCCCCEEEEE-ECCCCCCCCC
T ss_conf 78412322444568867-------------------------732488889999998741156637997-0487556763
Q ss_pred ----HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCC-----------------CCCCEEEEE
Q ss_conf ----03899999999998589617999864236765246555310138970456-----------------467189999
Q gi|254780291|r 383 ----SSIDQKRMFEKFLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKN-----------------SKNEFILLE 441 (475)
Q Consensus 383 ----sSi~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSv-----------------pkNrF~~le 441 (475)
........|...+.++++..+|.||.|.-..... ..++++..|+. ...-|.+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 243 (262)
T 3ib7_A 169 MAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATF-----VGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVH 243 (262)
T ss_dssp GGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEEE-----TTEEEEECCCSSCEECTTSCTTCCCEESCSCEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEE-----CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 11333334468899987436965999743481481799-----9999998087701452567888766756899769999
Q ss_pred ECCCEEEEEEEECCCCC
Q ss_conf 64885999998516763
Q gi|254780291|r 442 MTPHYINVTAYERRGKV 458 (475)
Q Consensus 442 m~~~~atITgY~~Rd~t 458 (475)
+++..++++.|...+..
T Consensus 244 ~~~~~~~~~~~~~~~~~ 260 (262)
T 3ib7_A 244 VYPDTVVHSVIPLGGGE 260 (262)
T ss_dssp ECSSCEEEEEEECSCCC
T ss_pred EECCCEEEEEEECCCCC
T ss_conf 96997799998648976
No 7
>>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national project on protein structural and functional analyses; 1.60A {Aquifex aeolicus VF5} (A:)
Probab=98.43 E-value=7.7e-06 Score=57.94 Aligned_cols=215 Identities=9% Similarity=0.016 Sum_probs=122.2
Q ss_pred CEEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHH---------------------------H
Q ss_conf 5155513310046314688999886116567897605100121267788888---------------------------6
Q gi|254780291|r 161 GIAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSSTTKELKRFY---------------------------N 213 (475)
Q Consensus 161 ~~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q~qL~eFr---------------------------~ 213 (475)
-|++++|.-+..+ ..+.+-...+..+.-+=++.|||++.+...+..... .
T Consensus 7 ri~~iSDlH~~~~---~~~~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (260)
T 2yvt_A 7 KVLAIKNFKERFD---LLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFR 83 (260)
T ss_dssp EEEEEECCTTCGG---GHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCHH---HHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 7999972899989---9999999876649999999566689987898999999987655102331101113677899998
Q ss_pred HH-CCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCC
Q ss_conf 72-655751302455444788-8766745455000003688899999999877655566654210010013444565521
Q gi|254780291|r 214 IY-SLKFPFFRGLGSQEYIGN-RPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETY 291 (475)
Q Consensus 214 Vw-nl~iPv~lGLGNHDYqNN-~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~ 291 (475)
.. ..+.|++.=.||||+..+ .... ... ..........
T Consensus 84 ~~~~~~~~~~~~~GNhd~~~~~~~~~-------------------------~~~------~~~~~~~~~~---------- 122 (260)
T 2yvt_A 84 EIGELGVKTFVVPGKNDAPLKIFLRA-------------------------AYE------AETAYPNIRV---------- 122 (260)
T ss_dssp HHHTTCSEEEEECCTTSCCHHHHHHH-------------------------HHH------TTTTCTTEEE----------
T ss_pred HHHHCCCCEEEEECCCCHHHHHHHHH-------------------------HHH------HHCCCCCCCC----------
T ss_conf 88753985899947883255566777-------------------------642------3113453201----------
Q ss_pred EEEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCE
Q ss_conf 03777544334302733555403641036751675300122221000256511343205655778878888840347957
Q gi|254780291|r 292 SISISGSQSYSWNIDNVHFIQANYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKY 371 (475)
Q Consensus 292 ~vei~GSLSYSWd~gdvHfVQ~NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~ 371 (475)
..-.+....+...++...... .. .... ....-.......+||++.+.+... +.
T Consensus 123 -----~~~~~~~~~~~~~~~~~~~~~-~~----~~~~---------------~~~~~~~~~~~~~~l~~~l~~~~~--~~ 175 (260)
T 2yvt_A 123 -----LHEGFAGWRGEFEVIGFGGLL-TE----HEFE---------------EDFVLKYPRWYVEYILKFVNELKP--RR 175 (260)
T ss_dssp -----CSSEEEEETTTEEEEEECSEE-ES----SCCB---------------SSSSCEEEHHHHHHHGGGGGGSCC--CE
T ss_pred -----CCCEEEEECCCEEEEEECCCC-CC----CCCC---------------CHHHHHHHHHHHHHHHHHHHHCCC--CC
T ss_conf -----243369953988999946767-76----5444---------------033333456789998764310145--65
Q ss_pred EEEECCCCCCC---------HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEE
Q ss_conf 99950047720---------038999999999985896179998642367652465553101389704564671899996
Q gi|254780291|r 372 IILFADDIDRF---------SSIDQKRMFEKFLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNSKNEFILLEM 442 (475)
Q Consensus 372 IILN~HD~~~~---------sSi~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvpkNrF~~lem 442 (475)
+|+-+|..+-. .....-..+..++...++..+|.||.|....+ .+..++++.|+...+.|..+++
T Consensus 176 ~iv~~hh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~i~GH~H~~~~~------~~~~~~v~~Gs~~~~~~~~~~~ 249 (260)
T 2yvt_A 176 LVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHEL------VGNTIVVNPGEFEEGRYAFLDL 249 (260)
T ss_dssp EEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEEEE------ETTEEEEECCBGGGTEEEEEET
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCEEE------ECCEEEEECCCCCCCEEEEEEE
T ss_conf 3899850235665444443220112057888764029819999603077787------1998999836053585999998
Q ss_pred CCCEEEEEEE
Q ss_conf 4885999998
Q gi|254780291|r 443 TPHYINVTAY 452 (475)
Q Consensus 443 ~~~~atITgY 452 (475)
.+..+.|.-|
T Consensus 250 ~~~~~~i~~~ 259 (260)
T 2yvt_A 250 TQHKIKLEQF 259 (260)
T ss_dssp TTTEEEEEEC
T ss_pred CCCEEEEEEC
T ss_conf 1997999976
No 8
>>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} (A:)
Probab=98.21 E-value=1.5e-06 Score=62.62 Aligned_cols=192 Identities=10% Similarity=-0.071 Sum_probs=104.0
Q ss_pred EEEEECCCEECCC----------HHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHH------HHHHHHHHCCCCCEEECC
Q ss_conf 1555133100463----------146889998861165678976051001212677------888886726557513024
Q gi|254780291|r 162 IAVIADPWYKADT----------PMFVEAINSLKSSKNIILGILTGDMTQSSTTKE------LKRFYNIYSLKFPFFRGL 225 (475)
Q Consensus 162 ~~~~~~pw~k~~~----------~~~vesinsl~~~~~~~~gIINGDLTeFG~q~q------L~eFr~Vwnl~iPv~lGL 225 (475)
|++++|.-+-... .-.++.+.......+.-|-++.||+++.+.... ...+....+.++|++.-+
T Consensus 3 il~~sD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~ 82 (333)
T 1ii7_A 3 FAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIE 82 (333)
T ss_dssp EEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEEEC
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 99992476898776613668999999999999999749999998988788997998999999987776651398579826
Q ss_pred CCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEE
Q ss_conf 55444788-87667454550000036888999999998776555666542100100134445655210377754433430
Q gi|254780291|r 226 GSQEYIGN-RPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWN 304 (475)
Q Consensus 226 GNHDYqNN-~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd 304 (475)
||||+..+ .... +.... ......... . ........+.+.
T Consensus 83 GNHD~~~~~~~~~---------------------~~~~~----------~~~~~~~~~-~--------~~~~~~~~~~~~ 122 (333)
T 1ii7_A 83 GNHDRTQRGPSVL---------------------NLLED----------FGLVYVIGM-R--------KEKVENEYLTSE 122 (333)
T ss_dssp CTTTCCSSSCCHH---------------------HHHHH----------TTSCEECEE-E--------SSCCCSSSEEEE
T ss_pred CCCCCCCCCCHHH---------------------HHHHH----------CCCEEECCC-C--------CCCCCCEEECCC
T ss_conf 7546656641367---------------------78986----------597076134-3--------211222032034
Q ss_pred CCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCC--
Q ss_conf 273355540364103675167530012222100025651134320565577887888884034795799950047720--
Q gi|254780291|r 305 IDNVHFIQANYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKYIILFADDIDRF-- 382 (475)
Q Consensus 305 ~gdvHfVQ~NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~IILN~HD~~~~-- 382 (475)
+++.++.-.......... .-.-.......+|+.+++.++...+..+|+.+|.....
T Consensus 123 ~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~ 180 (333)
T 1ii7_A 123 RLGNGEYLVKGVYKDLEI----------------------HGMKYMSSAWFEANKEILKRLFRPTDNAILMLHQGVREVS 180 (333)
T ss_dssp ECTTSCEEEEEEETTEEE----------------------EEECCCCHHHHHSSTTHHHHHCCCCSSEEEEEECCBHHHH
T ss_pred CCCCCCEEECCCCCCEEE----------------------ECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
T ss_conf 446420230356676379----------------------6564512667889999876520567765877311335666
Q ss_pred -HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
Q ss_conf -038999999999985896179998642367652
Q gi|254780291|r 383 -SSIDQKRMFEKFLTQSKISTIFTTRFTSSPESY 415 (475)
Q Consensus 383 -sSi~~KrmFks~itk~nV~AIF~aH~Hqshe~~ 415 (475)
........+...+..++|.+||.||.|+.....
T Consensus 181 ~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 214 (333)
T 1ii7_A 181 EARGEDYFEIGLGDLPEGYLYYALGHIHKRYETS 214 (333)
T ss_dssp HTTTCCCCSBCGGGSCTTCSEEEEESCSSCEEEE
T ss_pred CCCCCCCCCCHHHHHCCCCCEEEECCCCCCEECC
T ss_conf 7777555420134521378789868656621604
No 9
>>2q8u_A Exonuclease, putative; TM1635, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.20A {Thermotoga maritima MSB8} (A:1-281)
Probab=98.03 E-value=1e-05 Score=57.16 Aligned_cols=202 Identities=9% Similarity=-0.006 Sum_probs=106.6
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHH---HHHHH---CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 6889998861165678976051001212677888---88672---65575130245544478887667454550000036
Q gi|254780291|r 177 FVEAINSLKSSKNIILGILTGDMTQSSTTKELKR---FYNIY---SLKFPFFRGLGSQEYIGNRPCRDPYTLTPSIYGCA 250 (475)
Q Consensus 177 ~vesinsl~~~~~~~~gIINGDLTeFG~q~qL~e---Fr~Vw---nl~iPv~lGLGNHDYqNN~dC~~P~~~d~s~n~CA 250 (475)
.++++.+..+..+..|-++.||+++.|...+... +.... ....|++.-.|||||.......
T Consensus 49 ~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~~~~~~~~------------- 115 (281)
T 2q8u_A 49 ALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRXXRTAPVVVLPGNHDWKGLKLFG------------- 115 (281)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHHHSCEEECCC------CHHHH-------------
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC-------------
T ss_conf 9999999999719989998987788999888999998899999841588789955887631134321-------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCHH
Q ss_conf 88899999999877655566654210010013444565521037775443343027335554036410367516753001
Q gi|254780291|r 251 FIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWNIDNVHFIQANYSMFHSVYFNDEWSNI 330 (475)
Q Consensus 251 ~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd~gdvHfVQ~NYpsy~~V~~n~~~~~a 330 (475)
. .+ ....+...... .+.-.+....+...+.........
T Consensus 116 --------~---~~------~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~----------- 153 (281)
T 2q8u_A 116 --------N---FV------TSISSDITFVX--------------SFEPVDVEAKRGQKVRILPFPYPD----------- 153 (281)
T ss_dssp --------H---HH------HHHCSSEEECC--------------SSSCEEEECTTSCEEEEEEECCC------------
T ss_pred --------C---CC------CCCCCCCEECC--------------CCCCEEEEECCCCEEEEEECCCCC-----------
T ss_conf --------1---00------01245510024--------------557568861048659999614676-----------
Q ss_pred HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH------HHHHHHHHHHHCCCCEEE
Q ss_conf 22221000256511343205655778878888840347957999500477200389------999999999858961799
Q gi|254780291|r 331 FTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKYIILFADDIDRFSSID------QKRMFEKFLTQSKISTIF 404 (475)
Q Consensus 331 f~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~IILN~HD~~~~sSi~------~KrmFks~itk~nV~AIF 404 (475)
...............-.+|+...+..+......+++..|......... ....|...+.+++|..||
T Consensus 154 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vl 225 (281)
T 2q8u_A 154 --------ESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFXGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAA 225 (281)
T ss_dssp --------------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC--------CCCEECGGGSCTTSSEEE
T ss_pred --------CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECEECCCCCCCCCCCCCCCCCCHHHHHCCCCEEE
T ss_conf --------222223430577899999999999863565675389730122266677853247654553777523662565
Q ss_pred EEEEECCCCCCCCCCCCCEEEEEEECC--------CCCCCEEEEEECCCE
Q ss_conf 986423676524655531013897045--------646718999964885
Q gi|254780291|r 405 TTRFTSSPESYIKDSTGRPVRVYNINK--------NSKNEFILLEMTPHY 446 (475)
Q Consensus 405 ~aH~Hqshe~~lec~~GykVPvy~iGS--------vpkNrF~~lem~~~~ 446 (475)
.||.|.......+. +++|..++ -.++.|..+++....
T Consensus 226 ~GH~H~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 270 (281)
T 2q8u_A 226 LGHIHSFREIQKQP-----LTIYPGSLIRIDFGEEADEKGAVFVELKRGE 270 (281)
T ss_dssp EESCSSCEEEEETT-----EEEECCCSSCCSGGGTTCCCEEEEEEEETTS
T ss_pred ECCCCCCCEECCCC-----CEEECCCCCCCCCCCCCCCCEEEEEEEECCC
T ss_conf 06666663306898-----8586489616774503899869999980898
No 10
>>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} (A:1-98,A:224-274)
Probab=97.92 E-value=3e-05 Score=54.05 Aligned_cols=72 Identities=17% Similarity=0.284 Sum_probs=55.5
Q ss_pred EEEEECCCEECCCH---------HHH-HHHHHH-HHCCCEEEEEEECCCCCCCCHHHHHHHHHHH-CCCCCEEECCCCCC
Q ss_conf 15551331004631---------468-899988-6116567897605100121267788888672-65575130245544
Q gi|254780291|r 162 IAVIADPWYKADTP---------MFV-EAINSL-KSSKNIILGILTGDMTQSSTTKELKRFYNIY-SLKFPFFRGLGSQE 229 (475)
Q Consensus 162 ~~~~~~pw~k~~~~---------~~v-esinsl-~~~~~~~~gIINGDLTeFG~q~qL~eFr~Vw-nl~iPv~lGLGNHD 229 (475)
|++|+|+-+..... -+. +.++.+ ....+..|=|+.|||++.|...+++++...+ .+++|++.-.||||
T Consensus 3 il~iSDlHlg~~~~~~~~~~~~~~~l~~ii~~i~a~~~~~D~Vvi~GDl~d~~~~~~~~~~~~~L~~l~ipv~~V~GNHD 82 (149)
T 3d03_A 3 LAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGNHD 82 (149)
T ss_dssp EEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSSCEEEECCTTS
T ss_pred EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 99990566798863202676899999999999983589999999883257088405899999997514887899906742
Q ss_pred CCCC
Q ss_conf 4788
Q gi|254780291|r 230 YIGN 233 (475)
Q Consensus 230 YqNN 233 (475)
|.+.
T Consensus 83 ~~~~ 86 (149)
T 3d03_A 83 DKAL 86 (149)
T ss_dssp CHHH
T ss_pred HHHH
T ss_conf 1678
No 11
>>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} (A:99-223)
Probab=97.47 E-value=0.00023 Score=48.26 Aligned_cols=107 Identities=10% Similarity=0.157 Sum_probs=67.4
Q ss_pred EEEEEEEECCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 54433430273355540364103675167530012222100025651134320565577887888884034795799950
Q gi|254780291|r 297 GSQSYSWNIDNVHFIQANYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKYIILFA 376 (475)
Q Consensus 297 GSLSYSWd~gdvHfVQ~NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~IILN~ 376 (475)
|..-|++++++++||-+|-..+.. ..++. ..+--+||+++|.++.++.+.++..-
T Consensus 5 g~~~y~~~~~~~~~I~lds~~~~~---~~~~~----------------------~~~q~~wl~~~L~~~~~~~~iv~~Hh 59 (125)
T 3d03_A 5 NNMRCAVDDFATRLLFIDSSRAGT---SKGWL----------------------TDETISWLEAQLFEGGDKPATIFMHH 59 (125)
T ss_dssp GGCCEEECSSSSEEEECCCCCTTC---SSBCC----------------------CHHHHHHHHHHHHHHTTSCEEEEESS
T ss_pred CCCEEEEECCCEEEEECCCCCCCC---CCCCC----------------------CHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 762489953875798414566898---75400----------------------49999899998653136664787503
Q ss_pred CCCCC-------CHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCC
Q ss_conf 04772-------0038999999999985896179998642367652465553101389704564
Q gi|254780291|r 377 DDIDR-------FSSIDQKRMFEKFLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNS 433 (475)
Q Consensus 377 HD~~~-------~sSi~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvp 433 (475)
+=... .......++++.+..+++|.++|.||.|... ...-..++++..|+..
T Consensus 60 p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~l~GH~H~~~-----~~~~~~~~~~~~~s~~ 118 (125)
T 3d03_A 60 PPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLT-----MTQYRQALISTLPGTV 118 (125)
T ss_dssp CSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCE-----EEEETTEEEEECCCSS
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHH-----HEEECCEEEEECCCCC
T ss_conf 7524686533333433527789999735784699817756246-----1489999999869530
No 12
>>1t71_A Phosphatase, conserved; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} (A:)
Probab=96.36 E-value=0.046 Score=33.00 Aligned_cols=71 Identities=17% Similarity=0.223 Sum_probs=54.3
Q ss_pred EEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCC
Q ss_conf 155513310046314688999886116567897605100121267788888672655751302455444788
Q gi|254780291|r 162 IAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSSTTKELKRFYNIYSLKFPFFRGLGSQEYIGN 233 (475)
Q Consensus 162 ~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q~qL~eFr~Vwnl~iPv~lGLGNHDYqNN 233 (475)
|+.+.|--...+-..+.+.+.++.+.....+-+++||+++.++.....-+ ...+...|.+.-+|||||...
T Consensus 7 i~h~sD~H~~~~~~~~~~~i~~~~~~~~~dlvv~~GD~~~~~~~~~~~~~-~~l~~~~~~~~~~GNHd~~~~ 77 (281)
T 1t71_A 7 FIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHY-EFLKEAGVNYITMGNHTWFQK 77 (281)
T ss_dssp EEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHH-HHHHHHTCCEEECCTTTTCCG
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHH-HHHHHHCCCEEECCCHHHHCC
T ss_conf 99998068888999999981999998199999989866788949899999-999971796797571465440
No 13
>>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} (A:1-117,A:290-322)
Probab=94.34 E-value=0.046 Score=33.06 Aligned_cols=65 Identities=8% Similarity=0.084 Sum_probs=47.2
Q ss_pred EECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHH------HHHHHHH-CCCCCEEECCCCCCCCCCC
Q ss_conf 004631468899988611656789760510012126778------8888672-6557513024554447888
Q gi|254780291|r 170 YKADTPMFVEAINSLKSSKNIILGILTGDMTQSSTTKEL------KRFYNIY-SLKFPFFRGLGSQEYIGNR 234 (475)
Q Consensus 170 ~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q~qL------~eFr~Vw-nl~iPv~lGLGNHDYqNN~ 234 (475)
...+..-.++.+.......++-|=|+.||+.+....... +.+.... .-++|+|.-.||||+.+..
T Consensus 32 ~~~~~~~~l~~l~~~i~~~~pD~Vi~~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~i~v~~I~GNHD~~~~~ 103 (150)
T 2nxf_A 32 YYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVXAELDACSVDVHHVWGNHEFYNFS 103 (150)
T ss_dssp CTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHHTTCSEEEECCCHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf 578889999999999742799999999987889875236899999999999987599889986248533330
No 14
>>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} (A:)
Probab=91.24 E-value=0.19 Score=28.99 Aligned_cols=68 Identities=15% Similarity=0.139 Sum_probs=47.3
Q ss_pred EEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC
Q ss_conf 15551331004631468899988611656789760510012126778888867265575130245544478887
Q gi|254780291|r 162 IAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSSTTKELKRFYNIYSLKFPFFRGLGSQEYIGNRP 235 (475)
Q Consensus 162 ~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q~qL~eFr~Vwnl~iPv~lGLGNHDYqNN~d 235 (475)
|++|+|--...+.+-.++++-......+.-.=|+.||+++.+....+.+ ++.|++.=+||||+.--.+
T Consensus 28 I~~iSDiHg~~~~~~~~~~~~~~~~~~~~D~iv~~GDl~~~~~~~~l~~------l~~~~~~V~GNhd~~~~~~ 95 (215)
T 2a22_A 28 VLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQEYVEMLKN------ITKNVYIVSGDLDSAIFNP 95 (215)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCHHHHHHHHH------HCSCEEECCCTTCCSCCBC
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH------HCCCEEEEECCCCCHHHHH
T ss_conf 9999267885542101299999747478898998999999899999996------4997799937978213344
No 15
>>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initiative, midwest center for structural genomics, PSI, MCSG; 2.40A {Aquifex aeolicus VF5} (A:)
Probab=89.82 E-value=0.56 Score=25.86 Aligned_cols=46 Identities=20% Similarity=0.091 Sum_probs=37.0
Q ss_pred HHCCCEEEEEEECCCCCCCCHHHHHHHHHHH-CCCCCEEECCCCCCCCC
Q ss_conf 6116567897605100121267788888672-65575130245544478
Q gi|254780291|r 185 KSSKNIILGILTGDMTQSSTTKELKRFYNIY-SLKFPFFRGLGSQEYIG 232 (475)
Q Consensus 185 ~~~~~~~~gIINGDLTeFG~q~qL~eFr~Vw-nl~iPv~lGLGNHDYqN 232 (475)
....++-+=++.||+++.|... +++-+.+ .+++|++.=.||||..-
T Consensus 39 ~~~~~~D~vi~~GDl~~~~~~~--~~~~~~l~~~~~p~~~v~GNHD~~~ 85 (195)
T 1xm7_A 39 KVLKPEDTLYHLGDFTWHFNDK--NEYLRIWKALPGRKILVMGNHDKDK 85 (195)
T ss_dssp TTCCTTCEEEECSCCBSCSCCT--TSHHHHHHHSSSEEEEECCTTCCCH
T ss_pred HHCCCCCEEEEECCCCCCCCCH--HHHHHHHHHCCCCEEEEEECCCCHH
T ss_conf 5178898899918841346768--9999999975998699962699626
No 16
>>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} (A:)
Probab=88.22 E-value=1.8 Score=22.58 Aligned_cols=62 Identities=13% Similarity=0.049 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCEEEEEEEE
Q ss_conf 9999999998589617999864236765246555310138970456467189999648859999985
Q gi|254780291|r 387 QKRMFEKFLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNSKNEFILLEMTPHYINVTAYE 453 (475)
Q Consensus 387 ~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvpkNrF~~lem~~~~atITgY~ 453 (475)
.....+...+.-++.-++.+|- .-....+..+.-|++.||+...+|-++|++..+++++-++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~gh~-----h~p~~~~~~~~~~inpGsi~~p~~~il~~~~~~~~~~~~~ 177 (178)
T 2kkn_A 116 DLKDRLLKVFNEKPQVILFGHT-----HEPEDTVKAGVRFLNPGSLAEGSYAVLELDGGEVRFELKT 177 (178)
T ss_dssp HHHHHHHHHSSSCCSEEECCSC-----SSCCEEEETTEEEECCCCTTTTEEEEEEEETTEEEEEEEE
T ss_pred CHHHHHHHHHCCCCCEEEECCC-----CCEEEEEECCEEEEECCCCCCCEEEEEEEECCEEEEEEEE
T ss_conf 0447888864459999998884-----7436999899999959989999899999979999999997
No 17
>>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae TIGR4} (A:)
Probab=87.54 E-value=1.8 Score=22.46 Aligned_cols=71 Identities=11% Similarity=0.076 Sum_probs=51.7
Q ss_pred HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCC-------CCCEEEEEECCCEEEEEEEECCCCCHHHH
Q ss_conf 99999985896179998642367652465553101389704564-------67189999648859999985167636787
Q gi|254780291|r 390 MFEKFLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNS-------KNEFILLEMTPHYINVTAYERRGKVPHIT 462 (475)
Q Consensus 390 mFks~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvp-------kNrF~~lem~~~~atITgY~~Rd~tPhi~ 462 (475)
-.+...+..+.-.+|.||-|....... ..+.++|.||+. ...|-++|.+....+++-+......-..+
T Consensus 96 ~~~~~~~~~~~divi~GHtH~~~~~~~-----~~~~~iNpGSig~p~~~~~~~~~aild~~~~~~~~~~~~v~yd~~~~~ 170 (176)
T 3ck2_A 96 KLDYWAQEEEAAICLYGHLHVPSAWLE-----GKILFLNPGSISQPRGTIRECLYARVEIDDSYFKVDFLTRDHEVYPGL 170 (176)
T ss_dssp HHHHHHHHTTCSEEECCSSCCEEEEEE-----TTEEEEEECCSSSCCTTCCSCCEEEEEECSSEEEEEEECTTSCBCTTC
T ss_pred HHHHHHHHCCCCEEEECCCCCEEEEEE-----CCEEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEEEEECCCEEHHH
T ss_conf 999998743998999788874159998-----999999269877778999876799999949999999998689192543
Q ss_pred HHC
Q ss_conf 524
Q gi|254780291|r 463 RKM 465 (475)
Q Consensus 463 ekl 465 (475)
+++
T Consensus 171 ~~~ 173 (176)
T 3ck2_A 171 SKE 173 (176)
T ss_dssp CEE
T ss_pred HHE
T ss_conf 411
No 18
>>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} (A:)
Probab=84.08 E-value=0.99 Score=24.22 Aligned_cols=67 Identities=16% Similarity=0.050 Sum_probs=46.4
Q ss_pred CEEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCC
Q ss_conf 5155513310046314688999886116567897605100121267788888672655751302455444788
Q gi|254780291|r 161 GIAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSSTTKELKRFYNIYSLKFPFFRGLGSQEYIGN 233 (475)
Q Consensus 161 ~~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q~qL~eFr~Vwnl~iPv~lGLGNHDYqNN 233 (475)
-|+++.|---.....-.++++-....+.++-.=|+.||+++-+....+.+ ++.|++.|-||||+..-
T Consensus 12 rI~viSDiHg~~~al~~~~~~l~~~~~~~~D~ii~~GD~~~~~~~~~l~~------l~~~~i~v~gn~d~~~~ 78 (192)
T 1z2w_A 12 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKT------LAGDVHIVRGDFDENLN 78 (192)
T ss_dssp EEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSHHHHHHHHH------HCSEEEECCCTTCCCTT
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH------HCCCEEEECCCCCCCCC
T ss_conf 99999007888751026799999853269899999967974434999985------49977997277430123
No 19
>>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} (A:)
Probab=61.99 E-value=10 Score=17.53 Aligned_cols=236 Identities=14% Similarity=0.054 Sum_probs=109.7
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHH---------------CCCCCEEECCCCCCCCCCCCC
Q ss_conf 46314688999886116567897605100121267788888672---------------655751302455444788876
Q gi|254780291|r 172 ADTPMFVEAINSLKSSKNIILGILTGDMTQSSTTKELKRFYNIY---------------SLKFPFFRGLGSQEYIGNRPC 236 (475)
Q Consensus 172 ~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q~qL~eFr~Vw---------------nl~iPv~lGLGNHDYqNN~dC 236 (475)
.+.+.+..-+..+...+...+.+-.||+.+-+-...+..+..-+ |-.......+||||+..-.+
T Consensus 38 ~~~~~~~~~i~~~~~~~~~~l~~~~GD~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~d~~~~GNHefD~g~~- 116 (341)
T 3gve_A 38 FGLARTAQLIQKHREQNPNTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTKTHPIISVXNALKYDAGTLGNHEFNYGLD- 116 (341)
T ss_dssp CCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHHHHHHHHHHHTSSCCHHHHHHHHTTCCBEECCGGGGTTCHH-
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHCCCCHH-
T ss_conf 6699999999999965899799977865778701444322034433334576289999986586079645211147889-
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCC---EEEEEEEEEEEEECCCEEEEEE
Q ss_conf 6745455000003688899999999877655566654210010013444565521---0377754433430273355540
Q gi|254780291|r 237 RDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETY---SISISGSQSYSWNIDNVHFIQA 313 (475)
Q Consensus 237 ~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~---~vei~GSLSYSWd~gdvHfVQ~ 313 (475)
. +.+.+.. ++....-+-..-...... .....+..-|. ++.+.-+.
T Consensus 117 -----------~--------l~~~~~~----------~~~~~i~~N~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~- 164 (341)
T 3gve_A 117 -----------F--------LDGTIKG----------ADFPIVNANVKTTSGENRYTPYVINEKTLIDE--NGNEQKVK- 164 (341)
T ss_dssp -----------H--------HHHHHHT----------CSSCEECSSEECTTSCBSSCCEEEEEEEEECT--TSCEEEEE-
T ss_pred -----------H--------HHHHHHC----------CCCCEEEEEEECCCCCCCCCCCCCCCEEEEEE--CCCEEEEE-
T ss_conf -----------9--------9999833----------78977987632367865578752341589984--58520389-
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCC-CEEEEECCCC---CCCHHHHHHH
Q ss_conf 36410367516753001222210002565113432056557788788888403479-5799950047---7200389999
Q gi|254780291|r 314 NYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREG-KYIILFADDI---DRFSSIDQKR 389 (475)
Q Consensus 314 NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~g-K~IILN~HD~---~~~sSi~~Kr 389 (475)
.+... ++-........... ..-....+..+++++.+.++++.+ -.||+..|-- +...+-.+..
T Consensus 165 -----------i~~~g-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~D~iI~l~H~G~~~~~~~~~~~~~ 231 (341)
T 3gve_A 165 -----------VGYIG-FVPPQIXTWDKKNL-EGQVQVQDIVESANETIPKXKAEGADVIIALAHTGIEKQAQSSGAENA 231 (341)
T ss_dssp -----------EEEEE-ECCTTHHHHTHHHH-TTTCEECCHHHHHHHHHHHHHHTTCSEEEEEECCCCCSSCCCTTCSSC
T ss_pred -----------EEEEC-CCCCCCCCCCCCCC-CCCEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCH
T ss_conf -----------98715-65764332346567-587188629999999988776369837999721375544334553407
Q ss_pred HHHHHHHHCCCCEEEEEEEECCC---------CCCCCCCCCCEEEEEEECCCCCCCEEE----EEECCCEEEEEEEEC
Q ss_conf 99999985896179998642367---------652465553101389704564671899----996488599999851
Q gi|254780291|r 390 MFEKFLTQSKISTIFTTRFTSSP---------ESYIKDSTGRPVRVYNINKNSKNEFIL----LEMTPHYINVTAYER 454 (475)
Q Consensus 390 mFks~itk~nV~AIF~aH~Hqsh---------e~~lec~~GykVPvy~iGSvpkNrF~~----lem~~~~atITgY~~ 454 (475)
..+-...--.+-.|+-+|-|... ..+..-.-+.++++...|+..+. ... ++-++...+++-+++
T Consensus 232 ~~~~a~~~~g~D~IiggH~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~~~~~ 308 (341)
T 3gve_A 232 VFDLATKTKGIDAIISGHQHGLFPSAEYAGVAQFNVEKGTINGIPVVXPSSWGKY-LGVIDLKLEKADGSWKVADSKG 308 (341)
T ss_dssp HHHHHHHCSCCCEEEECSSCCEESCGGGTTSTTEETTTTEETTEEEEEECSTTSE-EEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCE-EEEEEEEEECCCCCEEEEEEEE
T ss_conf 8999855998359963777754567643677775454787688799947856437-8899999992899389995245
No 20
>>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} (A:)
Probab=54.16 E-value=12 Score=17.05 Aligned_cols=101 Identities=5% Similarity=-0.048 Sum_probs=62.2
Q ss_pred HHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC---CCCCEEEEE-----------E
Q ss_conf 84034795799950047720038999999999985896179998642367652465---553101389-----------7
Q gi|254780291|r 363 FQAQREGKYIILFADDIDRFSSIDQKRMFEKFLTQSKISTIFTTRFTSSPESYIKD---STGRPVRVY-----------N 428 (475)
Q Consensus 363 ~~A~~~gK~IILN~HD~~~~sSi~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec---~~GykVPvy-----------~ 428 (475)
..++-+||+++|+|--..-.........++++..+++-..++..-....+....+. ..+...|+. .
T Consensus 19 ~~~~~~gk~~vi~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 98 (136)
T 1zzo_A 19 HGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFG 98 (136)
T ss_dssp EGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTT
T ss_pred EHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHCC
T ss_conf 08996898699995024443210001368999864212332111122331223456776177521444024799999849
Q ss_pred ECCCCCCCEEEEEECCCEEEEEEEECCCCCHHHHHHC
Q ss_conf 0456467189999648859999985167636787524
Q gi|254780291|r 429 INKNSKNEFILLEMTPHYINVTAYERRGKVPHITRKM 465 (475)
Q Consensus 429 iGSvpkNrF~~lem~~~~atITgY~~Rd~tPhi~ekl 465 (475)
+.+.| .++++|=++.-..+.|....+.+.+.++++
T Consensus 99 v~~~P--~~~iid~~g~i~~~~g~~~~~~l~~~i~~l 133 (136)
T 1zzo_A 99 VTQQP--AYAFVDPHGNVDVVRGRMSQDELTRRVTAL 133 (136)
T ss_dssp CCSSS--EEEEECTTCCEEEEESCCCHHHHHHHHHHH
T ss_pred CCCCC--EEEEECCCCEEEEEECCCCHHHHHHHHHHH
T ss_conf 98056--799996998499998999999999999998
No 21
>>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} (A:1-225)
Probab=47.07 E-value=18 Score=15.96 Aligned_cols=69 Identities=16% Similarity=0.089 Sum_probs=39.1
Q ss_pred EEEEECCCEECCCHHHHHHHHHHHHC----CCEEEEEEECCCCCCCCHH-HHHHHHHHHCCCCCEEECCCCCCCCC
Q ss_conf 15551331004631468899988611----6567897605100121267-78888867265575130245544478
Q gi|254780291|r 162 IAVIADPWYKADTPMFVEAINSLKSS----KNIILGILTGDMTQSSTTK-ELKRFYNIYSLKFPFFRGLGSQEYIG 232 (475)
Q Consensus 162 ~~~~~~pw~k~~~~~~vesinsl~~~----~~~~~gIINGDLTeFG~q~-qL~eFr~Vwnl~iPv~lGLGNHDYqN 232 (475)
++||.|-- .+-..|.+.+..+... ...-.=|..||+.+.|-.. +.-+|-.-...+-.++.=+||||..-
T Consensus 4 i~vIgDIH--G~~~~L~~ll~~i~~~~~~~~~~d~li~lGDlvdrG~~s~evi~~l~~l~~~~~~~~i~GNHe~~~ 77 (225)
T 1nnw_A 4 VAVLANIA--GNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKENVKIIRGKYDQII 77 (225)
T ss_dssp EEEEECCT--TCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHSCEEEECCHHHHHH
T ss_pred EEEEECCC--CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHH
T ss_conf 99998320--299999999999987531588877899937737898887999999997653078189806710888
No 22
>>1w9c_A CRM1 protein, exportin 1; nuclear protein, nuclear export complex; 2.3A {Homo sapiens} (A:1-156)
Probab=41.69 E-value=6.6 Score=18.82 Aligned_cols=55 Identities=22% Similarity=0.295 Sum_probs=33.7
Q ss_pred HHHHHHHH-CCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88888672-655751302455444788-87667454550000036888999999998776555
Q gi|254780291|r 208 LKRFYNIY-SLKFPFFRGLGSQEYIGN-RPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQI 268 (475)
Q Consensus 208 L~eFr~Vw-nl~iPv~lGLGNHDYqNN-~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~ 268 (475)
.++-..|+ |+--|++. -==-||++| -++++|+-+ .|.-+.++.+-+.+.++.+.+
T Consensus 60 ~~d~~~v~~~~ippLl~-~VL~DY~~svp~aRe~eVL-----~l~ttii~kl~~~i~~~vp~I 116 (156)
T 1w9c_A 60 SNDPQMVAENFVPPLLD-AVLIDYQRNVPAAREPEVL-----STMAIIVNKLGGHITAEIPQI 116 (156)
T ss_dssp CSCHHHHHHHTHHHHHH-HHHHHHHTSCGGGCCTHHH-----HHHHHHHHHHGGGGGGGHHHH
T ss_pred CCCHHHHHHHHHHHHHH-HHHHHHHHCCHHHCCHHHH-----HHHHHHHHHHHHHHHHHHHHH
T ss_conf 89889999987889999-9999998435532377799-----999999988877604569999
No 23
>>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3gb8_A (A:769-910)
Probab=38.44 E-value=5.8 Score=19.17 Aligned_cols=36 Identities=31% Similarity=0.508 Sum_probs=26.4
Q ss_pred CCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 444788-87667454550000036888999999998776555
Q gi|254780291|r 228 QEYIGN-RPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQI 268 (475)
Q Consensus 228 HDYqNN-~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~ 268 (475)
-||++| -++++|+-+ .|.-+.++.+-+.+.++.+++
T Consensus 20 ~DY~~~vp~aRe~eVL-----~l~ttii~kl~~~i~~~i~~I 56 (142)
T 3gjx_A 20 IDYQRNVPAAREPEVL-----STMAIIVNKLGGHITAEIPQI 56 (142)
T ss_dssp HHHHHSCGGGCCTHHH-----HHHHHHHHHHGGGTGGGHHHH
T ss_pred HHHHHCCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998523664026799-----999999999868667679999
No 24
>>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} (A:1-327)
Probab=30.43 E-value=32 Score=14.26 Aligned_cols=62 Identities=8% Similarity=0.043 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHH---HCCCEEEEEEECCCCCCCCHHHH----HHHHHHHCCCCCEEECCCCCCCCCCC
Q ss_conf 6314688999886---11656789760510012126778----88886726557513024554447888
Q gi|254780291|r 173 DTPMFVEAINSLK---SSKNIILGILTGDMTQSSTTKEL----KRFYNIYSLKFPFFRGLGSQEYIGNR 234 (475)
Q Consensus 173 ~~~~~vesinsl~---~~~~~~~gIINGDLTeFG~q~qL----~eFr~Vwnl~iPv~lGLGNHDYqNN~ 234 (475)
+.+-+.+.++.+. +..+.-+=++.||.+.-|.-... .....+-+-..|.+..+||||+..-.
T Consensus 30 ~~~~~~~~i~~~~~~~~~~~~d~~~~~ggd~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~GNHd~d~g~ 98 (327)
T 1hp1_A 30 GLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPL 98 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHTCCEEECCGGGGSSCH
T ss_pred CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHCCCCCEEEECHHHCCCCH
T ss_conf 799999999999999862599989997898888740425529989999987669989986326133488
No 25
>>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} (A:)
Probab=30.41 E-value=32 Score=14.26 Aligned_cols=104 Identities=8% Similarity=-0.072 Sum_probs=69.4
Q ss_pred HHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC--CCEEEEEEE--CC-------
Q ss_conf 8403479579995004772003899999999998589617999864236765246555--310138970--45-------
Q gi|254780291|r 363 FQAQREGKYIILFADDIDRFSSIDQKRMFEKFLTQSKISTIFTTRFTSSPESYIKDST--GRPVRVYNI--NK------- 431 (475)
Q Consensus 363 ~~A~~~gK~IILN~HD~~~~sSi~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~~--GykVPvy~i--GS------- 431 (475)
..++-+||+++|+|--..-.........++.+..+++-..+........++...+... +.+.|++.- |.
T Consensus 18 ~l~~~~gk~~ll~f~~~~C~~c~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 97 (136)
T 1lu4_A 18 DGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNV 97 (136)
T ss_dssp EGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTC
T ss_pred CHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHCCC
T ss_conf 18996999799999999584558761148887320232210133320145789999998499976111754899998499
Q ss_pred CCCCCEEEEEECCCEEEEEEEECCCCCHHHHHHCC
Q ss_conf 64671899996488599999851676367875246
Q gi|254780291|r 432 NSKNEFILLEMTPHYINVTAYERRGKVPHITRKMS 466 (475)
Q Consensus 432 vpkNrF~~lem~~~~atITgY~~Rd~tPhi~ekl~ 466 (475)
..--.++++|-+++-..+..+.+....+++.+.+.
T Consensus 98 ~~~P~~~lid~~G~i~~~~~~~~~~~~~~l~~~l~ 132 (136)
T 1lu4_A 98 PWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVA 132 (136)
T ss_dssp CSSSEEEEECTTSCEEEECCSSSCCCHHHHHHHHH
T ss_pred CCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHH
T ss_conf 82457999969974999845568799999999999
No 26
>>1x8h_A Beta-lactamase; hydrolase; 1.60A {Aeromonas hydrophila} (A:1-128)
Probab=29.80 E-value=26 Score=14.84 Aligned_cols=32 Identities=6% Similarity=0.030 Sum_probs=20.4
Q ss_pred CCCCEEEEEEEECCCCCCCCCCCCCEEEEEEE
Q ss_conf 89617999864236765246555310138970
Q gi|254780291|r 398 SKISTIFTTRFTSSPESYIKDSTGRPVRVYNI 429 (475)
Q Consensus 398 ~nV~AIF~aH~Hqshe~~lec~~GykVPvy~i 429 (475)
-++++||.+|+|.-|.-.+......++|+|-.
T Consensus 59 ~~i~~ii~TH~H~DH~gg~~~l~~~~~~i~~~ 90 (128)
T 1x8h_A 59 KPVLEVINTNYHTDRAGGNAYWKSIGAKVVST 90 (128)
T ss_dssp SCEEEEECSSSSHHHHTTHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHCCCEEEEC
T ss_conf 98559998889854346500144149749955
No 27
>>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} (A:1-127)
Probab=27.36 E-value=21 Score=15.44 Aligned_cols=58 Identities=9% Similarity=-0.015 Sum_probs=37.0
Q ss_pred CCEEEEECCCCCCCHH-HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC--CCEEEEEEE
Q ss_conf 9579995004772003-899999999998589617999864236765246555--310138970
Q gi|254780291|r 369 GKYIILFADDIDRFSS-IDQKRMFEKFLTQSKISTIFTTRFTSSPESYIKDST--GRPVRVYNI 429 (475)
Q Consensus 369 gK~IILN~HD~~~~sS-i~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~~--GykVPvy~i 429 (475)
++.+++ |++-... -.....+++.+...++.+||.+|+|.-|...+.-.- +.++++|-.
T Consensus 44 ~~~~Li---D~G~~~~~~~~~~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~p~~~iy~~ 104 (127)
T 1ycg_A 44 DKTALV---DTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELCPDAHVLCT 104 (127)
T ss_dssp SSCEEE---CCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHCTTCEEEEC
T ss_pred CCEEEE---ECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEC
T ss_conf 999999---2898578999999999754976853999578880278899999987899989976
No 28
>>1ak0_A P1 nuclease; endonuclease, reaction mechanism, thiophosphorylated oligonucleotides, glycosylated protein; HET: NAG ADS THS; 1.80A {Penicillium citrinum} (A:)
Probab=25.22 E-value=40 Score=13.66 Aligned_cols=133 Identities=13% Similarity=0.247 Sum_probs=70.8
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-------HHHHHHHHHHCCHHHCCCC---CCCCCCCCEEEEEE---EE
Q ss_conf 88766745455000003688899999999877-------6555666542100100134---44565521037775---44
Q gi|254780291|r 233 NRPCRDPYTLTPSIYGCAFIAINDISQQINDH-------YPQIKSIKEFNGDSQRYRN---RSWHGETYSISISG---SQ 299 (475)
Q Consensus 233 N~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy-------~~q~s~i~efN~Ds~~y~~---~~~~~~~~~vei~G---SL 299 (475)
++.|......+|.-..|+.+++.++...+.+- .-.++.+.+|-+|.+-=-- .--+|+...+.+.| +|
T Consensus 69 ~~~~~~~~~~~~~~~~~v~~ai~~~~~~L~~~~~~~~~~~~al~~LiHlvGDiHQPLH~~~~D~GGN~~~v~~~g~~~nL 148 (270)
T 1ak0_A 69 PTNCNVDYERDCGSSGCSISAIANYTQRVSDSSLSSENHAEALRFLVHFIGDMTQPLHDEAYAVGGNKINVTFDGYHDNL 148 (270)
T ss_dssp TTBCCCCHHHHSCTTCCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHTTSGGGGCCHHHHTTTCEEEETTEEEEH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCH
T ss_conf 76655345677887754999999999997489965689999999999882355687668877899983587679935768
Q ss_pred EEEEECCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEE------CCCCHHHHHHHHHHHCCCCC
Q ss_conf 33430273355540364103675167530012222100025651134320------56557788788888403479
Q gi|254780291|r 300 SYSWNIDNVHFIQANYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVS------NGSEISQWIRDDVFQAQREG 369 (475)
Q Consensus 300 SYSWd~gdvHfVQ~NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn------~~~~iskWL~~DL~~A~~~g 369 (475)
-.-||=+=+.+.+-.+|.... ..+...+.-+++........+...+ ...++.+|...-...|.+..
T Consensus 149 H~~WDs~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wa~Es~~la~~~~ 220 (270)
T 1ak0_A 149 HSDWDTYMPQKLIGGHALSDA----ESWAKTLVQNIESGNYTAQAIGWIKGDNISEPITTATRWASDANALVCTVV 220 (270)
T ss_dssp HHHHHTHHHHHHHSCCSHHHH----HHHHHHHHHHHHHSTTHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCCCCHH----HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 998852266541012473158----888999998710110388888641032000221589999999999999984
No 29
>>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus HB8} (A:1-151)
Probab=24.33 E-value=31 Score=14.38 Aligned_cols=48 Identities=17% Similarity=0.160 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHH-----CCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCC
Q ss_conf 8999999999985-----89617999864236765246555310138970456
Q gi|254780291|r 385 IDQKRMFEKFLTQ-----SKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKN 432 (475)
Q Consensus 385 i~~KrmFks~itk-----~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSv 432 (475)
-....++...+.. -++.+||.+|.|.-|..-+...-..++|+|-....
T Consensus 43 ~~~~~~~~~~l~~~~~~~~~i~~viiTH~H~DH~gg~~~l~~~~~~i~~~~~~ 95 (151)
T 2zo4_A 43 RAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGLGARVFLHEEE 95 (151)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHTTCEEEEEGGG
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCHHH
T ss_conf 78999999999975999767059995577811103289997433651146677
No 30
>>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} (A:1-123,A:245-258)
Probab=24.09 E-value=24 Score=15.06 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=26.6
Q ss_pred HCCCCEEEEEEEECCCCCCCCCC---CCCEEEEEEECC
Q ss_conf 58961799986423676524655---531013897045
Q gi|254780291|r 397 QSKISTIFTTRFTSSPESYIKDS---TGRPVRVYNINK 431 (475)
Q Consensus 397 k~nV~AIF~aH~Hqshe~~lec~---~GykVPvy~iGS 431 (475)
--++.+||.+|+|.-|-.-+... -+.++|+|-.-.
T Consensus 66 ~~~Id~I~iTH~H~DH~~Gl~~l~~~~~~~~~Iy~~~~ 103 (137)
T 3g1p_A 66 PGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPD 103 (137)
T ss_dssp TTSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCC
T ss_pred CCCCCEEEEECCCHHCCCCCCCHHHCCCCCCCEEECCC
T ss_conf 76354599973111013033200010366644795442
No 31
>>1jni_A NAPB;, diheme cytochrome C NAPB; dihaem cytochrome C, proteolytic fragment, nitrate reductase subunit, oxidoreductase; HET: HEM; 1.25A {Haemophilus influenzae} (A:)
Probab=23.40 E-value=13 Score=16.91 Aligned_cols=26 Identities=35% Similarity=0.715 Sum_probs=22.4
Q ss_pred HCCCC-CCCEEEEEEHHHCCCCCCCEE
Q ss_conf 23333-686089980542022015515
Q gi|254780291|r 138 LLPHK-QNMDIVVDVNKILNCHHKGIA 163 (475)
Q Consensus 138 ~~~~~-~~~~~~~~~~~~~~~~~~~~~ 163 (475)
|.||+ .+|.|-.+.|+-|.||-...|
T Consensus 40 lIPH~i~gy~It~~~N~Cl~CH~~~~a 66 (123)
T 1jni_A 40 MVPHSVANYQVTKNVNQCLNCHSPENS 66 (123)
T ss_dssp CCSSCCTTCCEETTEETTHHHHSTTTH
T ss_pred CCCCCCCCCEEECCCCCCCCCCCHHHH
T ss_conf 788036775320788727458687567
No 32
>>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC structure funded by NIH; 2.40A {Methanocaldococcus jannaschii} (A:)
Probab=22.77 E-value=44 Score=13.36 Aligned_cols=63 Identities=16% Similarity=0.177 Sum_probs=42.9
Q ss_pred CCEEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCC
Q ss_conf 551555133100463146889998861165678976051001212677888886726557513024554447
Q gi|254780291|r 160 KGIAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSSTTKELKRFYNIYSLKFPFFRGLGSQEYI 231 (475)
Q Consensus 160 ~~~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q~qL~eFr~Vwnl~iPv~lGLGNHDYq 231 (475)
.-|++|.|---..+ ..+++-...+....-.=|+.||+.+-|....+. .++.|++.=+||||..
T Consensus 26 mri~visDiHG~~~---~l~~~l~~i~~~~~D~ii~~GD~vd~g~~~~l~------~l~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 26 MKIGIMSDTHDHLP---NIRKAIEIFNDENVETVIHCGDFVSLFVIKEFE------NLNANIIATYGNNDGE 88 (190)
T ss_dssp CEEEEECCCTTCHH---HHHHHHHHHHHSCCSEEEECSCCCSTHHHHHGG------GCSSEEEEECCTTCCC
T ss_pred CEEEEEECCCCCHH---HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH------HCCCCEEEEECCCCCC
T ss_conf 58999980899969---999999999755999999878838989999987------3476089972765430
No 33
>>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} (A:1-132)
Probab=22.19 E-value=42 Score=13.47 Aligned_cols=44 Identities=11% Similarity=-0.006 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC--CCEEEEEEE
Q ss_conf 99999999998589617999864236765246555--310138970
Q gi|254780291|r 386 DQKRMFEKFLTQSKISTIFTTRFTSSPESYIKDST--GRPVRVYNI 429 (475)
Q Consensus 386 ~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~~--GykVPvy~i 429 (475)
.....+.+.+...++.+||.+|.|.-|.--+.... +-++|+|-.
T Consensus 64 ~~~~~l~~~~~~~~i~~ii~TH~H~DH~ggl~~l~~~~p~~~v~~~ 109 (132)
T 2q9u_A 64 EWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHKFTNATFVCT 109 (132)
T ss_dssp HHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGGSTTCEEEEC
T ss_pred HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 9999999755976784999898956688759999997069989978
No 34
>>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta- propeller, PKD superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei s-6} (A:302-391)
Probab=21.86 E-value=34 Score=14.10 Aligned_cols=16 Identities=6% Similarity=0.391 Sum_probs=11.4
Q ss_pred EEEEEEEECCCEEEEE
Q ss_conf 5443343027335554
Q gi|254780291|r 297 GSQSYSWNIDNVHFIQ 312 (475)
Q Consensus 297 GSLSYSWd~gdvHfVQ 312 (475)
..++|.|++||-....
T Consensus 31 ~~~~y~W~fgdg~~s~ 46 (90)
T 1l0q_A 31 DATEWKWDFGDGSSSK 46 (90)
T ss_dssp SCSEEEEECSSSCEEC
T ss_pred CCCEEEEECCCCCCCC
T ss_conf 9528999988997266
No 35
>>1ogy_B Diheme cytochrome C NAPB molecule: nitrate reductase; oxidoreductase; HET: MGD HEC; 3.2A {Rhodobacter sphaeroides} (B:)
Probab=21.80 E-value=17 Score=16.11 Aligned_cols=26 Identities=27% Similarity=0.758 Sum_probs=22.0
Q ss_pred HCCCC-CCCEEEEEEHHHCCCCCCCEE
Q ss_conf 23333-686089980542022015515
Q gi|254780291|r 138 LLPHK-QNMDIVVDVNKILNCHHKGIA 163 (475)
Q Consensus 138 ~~~~~-~~~~~~~~~~~~~~~~~~~~~ 163 (475)
+.||+ .+|.|-.+.|+-|.||-...|
T Consensus 41 ~IPH~iegy~I~~~~N~Cl~CH~~~~a 67 (130)
T 1ogy_B 41 VIPHSIEGYQLSVNANRCLECHRRQYS 67 (130)
T ss_dssp CBCSCCTTCCBSSSCBGGGGTSCCCCT
T ss_pred CCCCCCCCCEECCCCCCCCCCCCHHHH
T ss_conf 787247785550799826558786357
No 36
>>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} (A:1-114)
Probab=20.83 E-value=48 Score=13.10 Aligned_cols=34 Identities=9% Similarity=0.013 Sum_probs=27.1
Q ss_pred HHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEE
Q ss_conf 8589617999864236765246555310138970
Q gi|254780291|r 396 TQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNI 429 (475)
Q Consensus 396 tk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~i 429 (475)
..-++.+|+.+|+|.-|.--..-.....+|+|-.
T Consensus 61 ~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~i~~~ 94 (114)
T 1m2x_A 61 HGKKVIMNIATHSHDDRAGGLEYFGKIGAKTYST 94 (114)
T ss_dssp HCCCEEEEECSSSSTTTTTTHHHHHHTTCEEEEE
T ss_pred HCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEC
T ss_conf 1997499996799965006299997689969970
No 37
>>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistance, structure, hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} (A:1-143)
Probab=20.60 E-value=26 Score=14.90 Aligned_cols=46 Identities=7% Similarity=0.037 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHH--HHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEE
Q ss_conf 389999999999--8589617999864236765246555310138970
Q gi|254780291|r 384 SIDQKRMFEKFL--TQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNI 429 (475)
Q Consensus 384 Si~~KrmFks~i--tk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~i 429 (475)
.-...++++.+. ..-++.+||.+|.|.-|..-+.-.-..++|+|-.
T Consensus 51 ~~~~~~~~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~i~~~ 98 (143)
T 2fhx_A 51 NLGTQTLMDWVAKTMKPKKVVAINTHFHLDGTGGNEIYKKMGAETWSS 98 (143)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCSSSHHHHTTHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHCCCCCEEEEC
T ss_conf 899999999999766997699998999931128298863566628961
No 38
>>1vme_A Flavoprotein; TM0755, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: MSE; 1.80A {Thermotoga maritima} (A:1-142)
Probab=20.54 E-value=26 Score=14.88 Aligned_cols=61 Identities=11% Similarity=0.163 Sum_probs=38.0
Q ss_pred CCCCCEEEEECCCCCCCHHHH-HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCC---CCCEEEEEEE
Q ss_conf 347957999500477200389-999999999858961799986423676524655---5310138970
Q gi|254780291|r 366 QREGKYIILFADDIDRFSSID-QKRMFEKFLTQSKISTIFTTRFTSSPESYIKDS---TGRPVRVYNI 429 (475)
Q Consensus 366 ~~~gK~IILN~HD~~~~sSi~-~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~---~GykVPvy~i 429 (475)
+..++.+++ |++-....+ ....+++.+..-++.+||.+|.|.-|...+... .|-++++|-.
T Consensus 58 ~~~~~~iLi---D~G~~~~~~~~~~~l~~~~~~~~i~~ii~TH~H~DH~ggl~~l~~~~~~~~~v~~~ 122 (142)
T 1vme_A 58 KLNGANVLI---DGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDHSGSLPATLKTIGHDVEIIAS 122 (142)
T ss_dssp ECSSCEEEE---CCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEEC
T ss_pred EECCEEEEE---ECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 989978999---29882369999999997579657789992929641664299999873999799977
No 39
>>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, sugar binding protein, structural genomics; 2.05A {Burkholderia phymatum STM815} (A:1-110,A:244-265)
Probab=20.17 E-value=50 Score=13.01 Aligned_cols=88 Identities=1% Similarity=-0.078 Sum_probs=50.7
Q ss_pred HHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCC
Q ss_conf 87888884034795799950047720038999999999985896179998642367652465553101389704564671
Q gi|254780291|r 357 WIRDDVFQAQREGKYIILFADDIDRFSSIDQKRMFEKFLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNSKNE 436 (475)
Q Consensus 357 WL~~DL~~A~~~gK~IILN~HD~~~~sSi~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvpkNr 436 (475)
-++.=-.+|...|.-+++--.+.+.-....++..++.++ ..++-+|...-.. .....++-..-..+|++.+|.-+.++
T Consensus 26 ii~gi~~~a~~~gy~lii~~~~~~~~~~~~~~~~i~~l~-~~~vDGiIi~~~~-~~~~~i~~l~~~~IPvV~id~~~~~~ 103 (132)
T 2rgy_A 26 ILKQTDLELRAVHRHVVVATGCGESTPREQALEAVRFLI-GRDCDGVVVISHD-LHDEDLDELHRXHPKXVFLNRAFDAL 103 (132)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCSSSCHHHHHHHHHHHHH-HTTCSEEEECCSS-SCHHHHHHHHHHCSSEEEESSCCTTS
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHH-HCCCCEEEEECCC-CCHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf 999999999986997999968898641999999999998-5699989852232-10478998740376420352034322
Q ss_pred EEEEEECCCE
Q ss_conf 8999964885
Q gi|254780291|r 437 FILLEMTPHY 446 (475)
Q Consensus 437 F~~lem~~~~ 446 (475)
+..+.++..+
T Consensus 104 ~~~V~~D~~~ 113 (132)
T 2rgy_A 104 PDASFCPTAE 113 (132)
T ss_dssp GGGEECCHHH
T ss_pred CCCCCCCHHH
T ss_conf 3442035999
Done!