HHsearch results for GI: 254780291 and protein with PDBid: 1ii7_A

>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A

Probab=97.26  E-value=0.00016  Score=48.24  Aligned_cols=68  Identities=18%  Similarity=0.269  Sum_probs=45.5

Q ss_pred             CCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC--HHHHHHHHHHH----CCCCCEEECCCCCCCCCCCC
Q ss_conf             3100463146889998861165678976051001212--67788888672----65575130245544478887
Q gi|254780291|r  168 PWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSST--TKELKRFYNIY----SLKFPFFRGLGSQEYIGNRP  235 (475)
Q Consensus       168 pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~--q~qL~eFr~Vw----nl~iPv~lGLGNHDYqNN~d  235 (475)
                      ++...+...+.+.+-..-..+++-+=++.|||.+.+.  ...+..+....    ..++|++.=.||||+..+..
T Consensus        19 ~~~~~~~~~~~~~~v~~a~~~~vD~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~ipv~~i~GNHD~~~~~~   92 (333)
T 1ii7_A           19 PQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHDRTQRGP   92 (333)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEEECCTTTCCSSSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCH
T ss_conf             45799999999999999987399999989887889989999999999999999868995999646666210003