HHSEARCH alignment of GI: 254780291 and SCOP domain: d1uf3a_

Alignment
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}
Probab=98.68  E-value=3.4e-07  Score=64.33  Aligned_cols=217  Identities=10%  Similarity=0.094  Sum_probs=120.4

Q ss_pred             CCCEEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCH-HHHHHHHHHH-CCCCCEEECCCCCCCCCCCCC
Q ss_conf             15515551331004631468899988611656789760510012126-7788888672-655751302455444788876
Q gi|254780291|r  159 HKGIAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSSTT-KELKRFYNIY-SLKFPFFRGLGSQEYIGNRPC  236 (475)
Q Consensus       159 ~~~~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q-~qL~eFr~Vw-nl~iPv~lGLGNHDYqNN~dC  236 (475)
                      -+.|+++.|.  -.|.+.+ |++-.+.....+-+=|+.|||++.|.. .+..+|.... .+++|+|.=.||||....   
T Consensus         5 ~~~i~~~sd~--hg~~eal-e~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~---   78 (228)
T d1uf3a_           5 VRYILATSNP--MGDLEAL-EKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIW---   78 (228)
T ss_dssp             CCEEEEEECC--TTCHHHH-HHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSCSHH---
T ss_pred             CCEEEEEECC--CCCHHHH-HHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHH---
T ss_conf             4389999578--8999999-999998766198999989999999764168997554320345369999668874432---


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEECCC
Q ss_conf             67454550000036888999999998776555666542100100134445655210377754433430273355540364
Q gi|254780291|r  237 RDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWNIDNVHFIQANYS  316 (475)
Q Consensus       237 ~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd~gdvHfVQ~NYp  316 (475)
                                 .....+.    ..  .          .........               -..+.+..+++-++.....
T Consensus        79 -----------~~~~~~~----~~--~----------~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~  116 (228)
T d1uf3a_          79 -----------EYLREAA----NV--E----------LVHPEMRNV---------------HETFTFWRGPYLVAGVGGE  116 (228)
T ss_dssp             -----------HHHHHHH----HH--H----------HHCTTEEEC---------------BTSEEEETTTEEEEEECSE
T ss_pred             -----------HHHHHHC----CC--C----------CCCCCCCCC---------------CEEEEECCCCEEEEECCCC
T ss_conf             -----------1235532----53--2----------134421001---------------2034432687799960776


Q ss_pred             CEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH--HHHHHHHH
Q ss_conf             1036751675300122221000256511343205655778878888840347957999500477200389--99999999
Q gi|254780291|r  317 MFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKYIILFADDIDRFSSID--QKRMFEKF  394 (475)
Q Consensus       317 sy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~IILN~HD~~~~sSi~--~KrmFks~  394 (475)
                      ...-    ...               .............+|+.+.+..  ....+.|+-+|..+......  .-..+.+.
T Consensus       117 ~~~~----~~~---------------~~~~~~~~~~~~~~~l~~~l~~--~~~~~~il~~H~p~~~~~~~~~~~~~~~~~  175 (228)
T d1uf3a_         117 IADE----GEP---------------EEHEALRYPAWVAEYRLKALWE--LKDYPKIFLFHTMPYHKGLNEQGSHEVAHL  175 (228)
T ss_dssp             EESS----SCC---------------BSSSSCEEEHHHHHHHHGGGGG--SCSCCEEEEESSCBCBTTTBTTSBHHHHHH
T ss_pred             CCCC----CCC---------------CHHHHHHHHHHHHHHHHHHHHH--CCCCCEEEEEEEECCCCCCCCCCCHHHHHH
T ss_conf             5567----674---------------0334333357789999998753--247766999840015752100040989987


Q ss_pred             HHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCEEEEE
Q ss_conf             98589617999864236765246555310138970456467189999648859999
Q gi|254780291|r  395 LTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNSKNEFILLEMTPHYINVT  450 (475)
Q Consensus       395 itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvpkNrF~~lem~~~~atIT  450 (475)
                      ++.+++..++.||.|+..+     .. +...+++.|++..|+|.++|+.++.+.+.
T Consensus       176 ~~~~~~~lvl~GH~H~~~~-----~~-g~~~~v~pG~~~~g~y~~i~~~~~~ie~~  225 (228)
T d1uf3a_         176 IKTHNPLLVLVAGKGQKHE-----ML-GASWVVVPGDLSEGEYSLLDLRARKLETG  225 (228)
T ss_dssp             HHHHCCSEEEECCSSCEEE-----EE-TTEEEEECCBGGGTEEEEEETTTTEEEEE
T ss_pred             HHHCCCCEEEECCCCCCHH-----CC-CCEEEEECCCCCCCEEEEEECCCCEEEEE
T ss_conf             8741984999846456640-----20-98799978854456089998259889988


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: TT1561-like
domain: Hypothetical protein TT1561
species: Thermus thermophilus [TaxId: 274]