HHSEARCH alignment of GI: 254780291 and SCOP domain: d2hy1a1

Alignment
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.18  E-value=3.9e-10  Score=83.68  Aligned_cols=191  Identities=12%  Similarity=0.131  Sum_probs=116.7

Q ss_pred             HHHHHHHHHC-CCEEEEEEECCCCCCCCHHHHHHHHHHH-----CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             8899988611-6567897605100121267788888672-----655751302455444788876674545500000368
Q gi|254780291|r  178 VEAINSLKSS-KNIILGILTGDMTQSSTTKELKRFYNIY-----SLKFPFFRGLGSQEYIGNRPCRDPYTLTPSIYGCAF  251 (475)
Q Consensus       178 vesinsl~~~-~~~~~gIINGDLTeFG~q~qL~eFr~Vw-----nl~iPv~lGLGNHDYqNN~dC~~P~~~d~s~n~CA~  251 (475)
                      -..++.+.+. ...-|=|+.||||+.|...+++.|++..     .+++|++.=+||||+...                  
T Consensus        33 ~~~i~~i~~~~~~pD~vl~~GDl~~~g~~~~~~~~~~~l~~~~~~~~~p~~~v~GNHD~~~~------------------   94 (256)
T d2hy1a1          33 GELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAE------------------   94 (256)
T ss_dssp             HHHHHHHHHHTCCCSEEEECSCCBSSCCHHHHHHHHHHHHHHHHHHTCEEEECCCTTSCHHH------------------
T ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH------------------
T ss_conf             99999998438999999989988888871578999998643454059978997663222566------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCHHH
Q ss_conf             88999999998776555666542100100134445655210377754433430273355540364103675167530012
Q gi|254780291|r  252 IAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWNIDNVHFIQANYSMFHSVYFNDEWSNIF  331 (475)
Q Consensus       252 sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd~gdvHfVQ~NYpsy~~V~~n~~~~~af  331 (475)
                           +.    .+         +..   +.            .-.+...|++++++.+|+-+|-..+..   ..+.    
T Consensus        95 -----~~----~~---------~~~---~~------------~~~~~~~~~~~~~~~~~~~ldt~~~~~---~~g~----  134 (256)
T d2hy1a1          95 -----LR----KF---------LLD---EA------------PSMAPLDRVCMIDGLRIIVLDTSVPGH---HHGE----  134 (256)
T ss_dssp             -----HH----HH---------TTC---CC------------CCCSCCCEEEEETTEEEEECCCBCTTC---SSBC----
T ss_pred             -----HH----HH---------HCC---CC------------CCCCCCCEEEEECCCCEEEEEEEECCC---CCCC----
T ss_conf             -----65----42---------101---22------------345654158970443202331121377---6773----


Q ss_pred             HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH--------HHHHHHHHHHHHHCCCCEE
Q ss_conf             22210002565113432056557788788888403479579995004772003--------8999999999985896179
Q gi|254780291|r  332 TVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKYIILFADDIDRFSS--------IDQKRMFEKFLTQSKISTI  403 (475)
Q Consensus       332 ~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~IILN~HD~~~~sS--------i~~KrmFks~itk~nV~AI  403 (475)
                                        ...+--+||+++|.+.  .+++.|+.+|-.+-...        ......|..+++++++.++
T Consensus       135 ------------------~~~~~~~wl~~~L~~~--~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~  194 (256)
T d2hy1a1         135 ------------------IRASQLGWLAEELATP--APDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAI  194 (256)
T ss_dssp             ------------------CCHHHHHHHHHHHTSC--CTTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEE
T ss_pred             ------------------CCHHHHHHHHHHHHHH--HCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE
T ss_conf             ------------------2488889999998764--22670255204885545433343232357889999745692499


Q ss_pred             EEEEEECCCCCCCCCCCCCEEEEEEECCCC------------C-----CCEEEEEECCCEEEEEE
Q ss_conf             998642367652465553101389704564------------6-----71899996488599999
Q gi|254780291|r  404 FTTRFTSSPESYIKDSTGRPVRVYNINKNS------------K-----NEFILLEMTPHYINVTA  451 (475)
Q Consensus       404 F~aH~Hqshe~~lec~~GykVPvy~iGSvp------------k-----NrF~~lem~~~~atITg  451 (475)
                      |.||.|.....     ....+|++..||..            +     .-|.++++++..+..|.
T Consensus       195 ~~GH~H~~~~~-----~~~gi~~~~~~s~~~~~~~~~~~~~~~~~~~~~g~~lv~v~~d~~~~~~  254 (256)
T d2hy1a1         195 LAGHLHYSTNA-----TFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDTVVHSV  254 (256)
T ss_dssp             EECSSSSCEEE-----EETTEEEEECCCCC-------------------CEEEEEECSSCEEEEE
T ss_pred             ECCCCCHHHCE-----EECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEE
T ss_conf             74535632545-----9999999974985336666678887136658998899999789989993


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: GpdQ-like
domain: Rv0805 cyclic nucleotide phosphodiesterase
species: Mycobacterium tuberculosis [TaxId: 1773]