Query gi|254780291|ref|YP_003064704.1| hypothetical protein CLIBASIA_00880 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 475
No_of_seqs 13 out of 15
Neff 2.2
Searched_HMMs 13730
Date Tue May 24 18:03:20 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780291.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2nxfa1 d.159.1.12 (A:3-322) U 99.5 8.3E-13 6.1E-17 101.3 12.8 239 177-456 38-313 (320)
2 d2qfra2 d.159.1.1 (A:121-432) 99.3 8.2E-11 6E-15 88.2 13.2 179 162-409 10-205 (312)
3 d2hy1a1 d.159.1.11 (A:10-265) 99.2 3.9E-10 2.9E-14 83.7 13.1 191 178-451 33-254 (256)
4 d1utea_ d.159.1.1 (A:) Mammali 99.1 4.8E-10 3.5E-14 83.1 11.3 219 179-458 31-292 (302)
5 d3d03a1 d.159.1.11 (A:1-271) G 99.0 4.6E-09 3.4E-13 76.6 12.8 191 162-431 3-214 (271)
6 d1uf3a_ d.159.1.6 (A:) Hypothe 98.7 3.4E-07 2.4E-11 64.3 13.0 217 159-450 5-225 (228)
7 d2yvta1 d.159.1.6 (A:4-260) Un 98.4 7E-06 5.1E-10 55.6 13.3 83 364-452 165-256 (257)
8 d1ii7a_ d.159.1.4 (A:) Mre11 { 97.5 7.4E-05 5.4E-09 48.9 4.8 60 176-235 27-92 (333)
9 d2a22a1 d.159.1.7 (A:4-196) Va 91.9 0.37 2.7E-05 24.5 7.8 63 390-457 110-182 (193)
10 d1z2wa1 d.159.1.7 (A:1-182) Va 82.1 1.4 0.0001 20.7 6.7 60 394-458 102-171 (182)
11 d1nnwa_ d.159.1.5 (A:) Hypothe 81.6 1.5 0.00011 20.5 5.4 48 397-449 164-218 (251)
12 d3ck2a1 d.159.1.7 (A:1-173) Un 73.2 2.5 0.00018 19.0 6.4 60 393-457 96-162 (173)
13 d1s3la_ d.159.1.7 (A:) Putativ 71.8 2.7 0.0002 18.8 4.8 54 391-449 104-162 (165)
14 d1v77a_ c.6.3.2 (A:) Ribonucle 52.1 5.1 0.00037 16.9 2.9 81 156-240 86-173 (202)
15 d1zzoa1 c.47.1.10 (A:45-178) L 46.9 7.3 0.00053 15.9 3.5 31 436-466 104-134 (134)
16 d2j07a2 c.28.1.1 (A:2-171) DNA 32.7 6.9 0.0005 16.1 1.0 18 390-407 77-94 (170)
17 d1sena_ c.47.1.1 (A:) Thioredo 31.3 8.2 0.0006 15.6 1.2 21 358-378 14-34 (135)
18 d1v10a2 b.6.1.3 (A:137-304) La 30.0 13 0.00097 14.2 2.4 10 442-451 82-91 (168)
19 d1b4ra_ b.1.3.1 (A:) Polycyste 27.9 9.5 0.00069 15.2 1.1 12 298-309 26-37 (80)
20 d1nnha_ d.104.1.1 (A:) Hypothe 27.8 6.7 0.00049 16.2 0.3 16 42-57 12-27 (293)
21 d1wgoa_ b.1.3.1 (A:) VPS10 dom 27.6 9.2 0.00067 15.3 1.0 12 298-309 61-72 (123)
22 d1jnia_ a.138.1.3 (A:) Peripla 26.2 4.3 0.00031 17.5 -1.0 26 138-163 5-31 (68)
23 d1l0qa1 b.1.3.1 (A:302-391) Su 25.6 9.9 0.00072 15.1 0.8 15 296-310 30-44 (90)
24 d1ogyb_ a.138.1.3 (B:) Peripla 23.5 6 0.00044 16.5 -0.6 26 138-163 40-66 (127)
25 d1egza_ c.1.8.3 (A:) Endogluca 23.4 17 0.0013 13.4 4.9 51 356-406 200-255 (291)
26 d1e42a2 d.105.1.1 (A:825-937) 22.7 18 0.0013 13.4 2.5 22 422-443 55-80 (113)
27 d1su1a_ d.159.1.7 (A:) Phospho 22.6 18 0.0013 13.3 4.2 66 162-230 4-76 (184)
28 d1w9ca_ a.118.1.19 (A:) Export 21.0 9.9 0.00072 15.0 0.1 32 193-226 126-161 (321)
No 1
>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]}
Probab=99.45 E-value=8.3e-13 Score=101.32 Aligned_cols=239 Identities=10% Similarity=0.057 Sum_probs=132.7
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCCC------CCCHHHHHHHHHHH-CCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCH
Q ss_conf 6889998861165678976051001------21267788888672-655751302455444788-876674545500000
Q gi|254780291|r 177 FVEAINSLKSSKNIILGILTGDMTQ------SSTTKELKRFYNIY-SLKFPFFRGLGSQEYIGN-RPCRDPYTLTPSIYG 248 (475)
Q Consensus 177 ~vesinsl~~~~~~~~gIINGDLTe------FG~q~qL~eFr~Vw-nl~iPv~lGLGNHDYqNN-~dC~~P~~~d~s~n~ 248 (475)
+.+++..+ ...++.|-|+.||+++ .+...+++++.+.+ .+++|++...||||+.++ .+.......+.....
T Consensus 38 l~~~v~~i-~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~ 116 (320)
T d2nxfa1 38 LRDAVLQW-RRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRT 116 (320)
T ss_dssp HHHHHHHH-HHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHHTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC--
T ss_pred HHHHHHHH-HHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHCCCCCCCCHHHH
T ss_conf 99999998-64798999988987889873135799999999999997599889940467655431011000112403332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCC
Q ss_conf 36888999999998776555666542100100134445655210377754433430273355540364103675167530
Q gi|254780291|r 249 CAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWNIDNVHFIQANYSMFHSVYFNDEWS 328 (475)
Q Consensus 249 CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd~gdvHfVQ~NYpsy~~V~~n~~~~ 328 (475)
..+.. .... .-.+...+..+.++.+|+.++...+..........
T Consensus 117 ------------~~~~~-------------~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (320)
T d2nxfa1 117 ------------GTDTG-------------SDLI-----------GDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESE 160 (320)
T ss_dssp ----------------C-------------EECG-----------GGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSH
T ss_pred ------------CCCCC-------------CCCC-----------CCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCC
T ss_conf ------------12233-------------2235-----------77775302421797499994474333445655652
Q ss_pred HHH-----HHHHHHCCCCCCEEE------------EEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCC------HHH
Q ss_conf 012-----222100025651134------------320565577887888884034795799950047720------038
Q gi|254780291|r 329 NIF-----TVAVPEHISKQDLPS------------HVSNGSEISQWIRDDVFQAQREGKYIILFADDIDRF------SSI 385 (475)
Q Consensus 329 ~af-----~Iqv~n~Id~q~l~s------------~Vn~~~~iskWL~~DL~~A~~~gK~IILN~HD~~~~------sSi 385 (475)
... .....-.+....++. ....+.+--+||++.|..+++.++++|+.+|.-... ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~~viv~~H~p~~~~~~~~~~~~ 240 (320)
T d2nxfa1 161 KHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLA 240 (320)
T ss_dssp HHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHTCEEEEEESSCCCTTSSCGGGSC
T ss_pred CCCCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCH
T ss_conf 10010000222146631110355434555554445544569999999999986464498559998878766778876302
Q ss_pred HHHHHHHHHHHHC-CCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCC-----CCCCEEEEEECCCEEEEEEEECCC
Q ss_conf 9999999999858-9617999864236765246555310138970456-----467189999648859999985167
Q gi|254780291|r 386 DQKRMFEKFLTQS-KISTIFTTRFTSSPESYIKDSTGRPVRVYNINKN-----SKNEFILLEMTPHYINVTAYERRG 456 (475)
Q Consensus 386 ~~KrmFks~itk~-nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSv-----pkNrF~~lem~~~~atITgY~~Rd 456 (475)
..-..|.+++.++ +|.+||.||.|.. + +.... ..++++..|++ .++.|.++|+.+..+.|+||-+..
T Consensus 241 ~~~~~~~~~l~~~~~V~~v~~GH~H~~-~-~~~~~--~g~~~i~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~ 313 (320)
T d2nxfa1 241 WNHEAVLSVLRSHQSVLCFIAGHDHDG-G-RCTDS--SGAQHITLEGVIETPPHSHAFATAYLYEDRMVMKGRGRVE 313 (320)
T ss_dssp TTHHHHHHHHHTCTTEEEEEECSCTTC-E-EEECT--TSCEEEECCCGGGCCTTSCEEEEEEECSSEEEEEEEETSC
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCC-C-EEECC--CCCEEEECCEEECCCCCCCCEEEEEEECCEEEEEEECCCC
T ss_conf 339999999985899559996886786-7-14356--9977997881322789999889999989999999823644
No 2
>d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.26 E-value=8.2e-11 Score=88.16 Aligned_cols=179 Identities=13% Similarity=0.171 Sum_probs=106.0
Q ss_pred EEEEECCCEECCCHHHHHHHHHH-HHCCCEEEEEEECCCC-----CCCCHHHHHHHHHHH---CCCCCEEECCCCCCCCC
Q ss_conf 15551331004631468899988-6116567897605100-----121267788888672---65575130245544478
Q gi|254780291|r 162 IAVIADPWYKADTPMFVEAINSL-KSSKNIILGILTGDMT-----QSSTTKELKRFYNIY---SLKFPFFRGLGSQEYIG 232 (475)
Q Consensus 162 ~~~~~~pw~k~~~~~~vesinsl-~~~~~~~~gIINGDLT-----eFG~q~qL~eFr~Vw---nl~iPv~lGLGNHDYqN 232 (475)
++|++|.=. +.--.+.+..+ ....+..|-|..|||. +.+-..+.++|.+.. ...+|++.-+|||||..
T Consensus 10 F~v~GD~g~---~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P~~~~~GNHD~~~ 86 (312)
T d2qfra2 10 FGLIGDLGQ---SFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEF 86 (312)
T ss_dssp EEEECSCCS---BHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCGGGTCC
T ss_pred EEEEEECCC---CCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC
T ss_conf 999963899---98549999999970899889998988876788865315899999999888764464898325100255
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEE
Q ss_conf 88766745455000003688899999999877655566654210010013444565521037775443343027335554
Q gi|254780291|r 233 NRPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWNIDNVHFIQ 312 (475)
Q Consensus 233 N~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd~gdvHfVQ 312 (475)
...-...+.+ ++.. .. |..-.... .-.+.+-||.++|++|||.
T Consensus 87 ~~~~~~~~~~------~~~~----------~~---------f~~P~~~~------------~~~~~~~Ysf~~g~v~fi~ 129 (312)
T d2qfra2 87 APEINETEPF------KPFS----------YR---------YHVPYEAS------------QSTSPFWYSIKRASAHIIV 129 (312)
T ss_dssp BGGGTBCSTT------HHHH----------HH---------CCCCGGGG------------TCSSTTSEEEEETTEEEEE
T ss_pred CCCCCCCCCC------CCHH----------HH---------CCCCCCCC------------CCCCCCEEEEEECCEEEEE
T ss_conf 6545666455------4213----------21---------36875456------------7888854899988888997
Q ss_pred ECCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCE-EEEECCCC---CC---C-HH
Q ss_conf 03641036751675300122221000256511343205655778878888840347957-99950047---72---0-03
Q gi|254780291|r 313 ANYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKY-IILFADDI---DR---F-SS 384 (475)
Q Consensus 313 ~NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~-IILN~HD~---~~---~-sS 384 (475)
++--... . .+.+--+||++||..+.+...+ +|+.+|-- .. . ..
T Consensus 130 Lds~~~~----~-------------------------~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~ 180 (312)
T d2qfra2 130 LSSYSAY----G-------------------------RGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEG 180 (312)
T ss_dssp CCTTSCC----S-------------------------TTSHHHHHHHHHHHTCCTTTCCEEEEECSSCSSCCBSTTTTTT
T ss_pred EECCCCC----C-------------------------CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 6435565----4-------------------------1679999999999987635888899980566300377886431
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 8999999999985896179998642
Q gi|254780291|r 385 IDQKRMFEKFLTQSKISTIFTTRFT 409 (475)
Q Consensus 385 i~~KrmFks~itk~nV~AIF~aH~H 409 (475)
...+..|+.++.+++|.++|.||.|
T Consensus 181 ~~~r~~l~~l~~~~~Vdlv~~GH~H 205 (312)
T d2qfra2 181 EAMRTKFEAWFVKYKVDVVFAGHVH 205 (312)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSSS
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf 5689999999997096899983675
No 3
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.18 E-value=3.9e-10 Score=83.68 Aligned_cols=191 Identities=12% Similarity=0.131 Sum_probs=116.7
Q ss_pred HHHHHHHHHC-CCEEEEEEECCCCCCCCHHHHHHHHHHH-----CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 8899988611-6567897605100121267788888672-----655751302455444788876674545500000368
Q gi|254780291|r 178 VEAINSLKSS-KNIILGILTGDMTQSSTTKELKRFYNIY-----SLKFPFFRGLGSQEYIGNRPCRDPYTLTPSIYGCAF 251 (475)
Q Consensus 178 vesinsl~~~-~~~~~gIINGDLTeFG~q~qL~eFr~Vw-----nl~iPv~lGLGNHDYqNN~dC~~P~~~d~s~n~CA~ 251 (475)
-..++.+.+. ...-|=|+.||||+.|...+++.|++.. .+++|++.=+||||+...
T Consensus 33 ~~~i~~i~~~~~~pD~vl~~GDl~~~g~~~~~~~~~~~l~~~~~~~~~p~~~v~GNHD~~~~------------------ 94 (256)
T d2hy1a1 33 GELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAE------------------ 94 (256)
T ss_dssp HHHHHHHHHHTCCCSEEEECSCCBSSCCHHHHHHHHHHHHHHHHHHTCEEEECCCTTSCHHH------------------
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH------------------
T ss_conf 99999998438999999989988888871578999998643454059978997663222566------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCHHH
Q ss_conf 88999999998776555666542100100134445655210377754433430273355540364103675167530012
Q gi|254780291|r 252 IAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWNIDNVHFIQANYSMFHSVYFNDEWSNIF 331 (475)
Q Consensus 252 sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd~gdvHfVQ~NYpsy~~V~~n~~~~~af 331 (475)
+. .+ +.. +. .-.+...|++++++.+|+-+|-..+.. ..+.
T Consensus 95 -----~~----~~---------~~~---~~------------~~~~~~~~~~~~~~~~~~~ldt~~~~~---~~g~---- 134 (256)
T d2hy1a1 95 -----LR----KF---------LLD---EA------------PSMAPLDRVCMIDGLRIIVLDTSVPGH---HHGE---- 134 (256)
T ss_dssp -----HH----HH---------TTC---CC------------CCCSCCCEEEEETTEEEEECCCBCTTC---SSBC----
T ss_pred -----HH----HH---------HCC---CC------------CCCCCCCEEEEECCCCEEEEEEEECCC---CCCC----
T ss_conf -----65----42---------101---22------------345654158970443202331121377---6773----
Q ss_pred HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH--------HHHHHHHHHHHHHCCCCEE
Q ss_conf 22210002565113432056557788788888403479579995004772003--------8999999999985896179
Q gi|254780291|r 332 TVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKYIILFADDIDRFSS--------IDQKRMFEKFLTQSKISTI 403 (475)
Q Consensus 332 ~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~IILN~HD~~~~sS--------i~~KrmFks~itk~nV~AI 403 (475)
...+--+||+++|.+. .+++.|+.+|-.+-... ......|..+++++++.++
T Consensus 135 ------------------~~~~~~~wl~~~L~~~--~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~ 194 (256)
T d2hy1a1 135 ------------------IRASQLGWLAEELATP--APDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAI 194 (256)
T ss_dssp ------------------CCHHHHHHHHHHHTSC--CTTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEE
T ss_pred ------------------CCHHHHHHHHHHHHHH--HCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE
T ss_conf ------------------2488889999998764--22670255204885545433343232357889999745692499
Q ss_pred EEEEEECCCCCCCCCCCCCEEEEEEECCCC------------C-----CCEEEEEECCCEEEEEE
Q ss_conf 998642367652465553101389704564------------6-----71899996488599999
Q gi|254780291|r 404 FTTRFTSSPESYIKDSTGRPVRVYNINKNS------------K-----NEFILLEMTPHYINVTA 451 (475)
Q Consensus 404 F~aH~Hqshe~~lec~~GykVPvy~iGSvp------------k-----NrF~~lem~~~~atITg 451 (475)
|.||.|..... ....+|++..||.. + .-|.++++++..+..|.
T Consensus 195 ~~GH~H~~~~~-----~~~gi~~~~~~s~~~~~~~~~~~~~~~~~~~~~g~~lv~v~~d~~~~~~ 254 (256)
T d2hy1a1 195 LAGHLHYSTNA-----TFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDTVVHSV 254 (256)
T ss_dssp EECSSSSCEEE-----EETTEEEEECCCCC-------------------CEEEEEECSSCEEEEE
T ss_pred ECCCCCHHHCE-----EECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEE
T ss_conf 74535632545-----9999999974985336666678887136658998899999789989993
No 4
>d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.12 E-value=4.8e-10 Score=83.13 Aligned_cols=219 Identities=16% Similarity=0.152 Sum_probs=114.9
Q ss_pred HHHHHHHHCCCEEEEEEECCCC-CCCCHHHH-HHHHHHH--------CCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCC
Q ss_conf 8999886116567897605100-12126778-8888672--------655751302455444788-87667454550000
Q gi|254780291|r 179 EAINSLKSSKNIILGILTGDMT-QSSTTKEL-KRFYNIY--------SLKFPFFRGLGSQEYIGN-RPCRDPYTLTPSIY 247 (475)
Q Consensus 179 esinsl~~~~~~~~gIINGDLT-eFG~q~qL-~eFr~Vw--------nl~iPv~lGLGNHDYqNN-~dC~~P~~~d~s~n 247 (475)
..+.......+.-|-|..||+. +.|...+. ..|.+.| ...+|+|.-+||||+.+| ..+.
T Consensus 31 ~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~---------- 100 (302)
T d1utea_ 31 KAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQI---------- 100 (302)
T ss_dssp HHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHH----------
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC----------
T ss_conf 9999998637998999899877778887520799999999875102204886698503653013532321----------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCC
Q ss_conf 03688899999999877655566654210010013444565521037775443343027335554036410367516753
Q gi|254780291|r 248 GCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWNIDNVHFIQANYSMFHSVYFNDEW 327 (475)
Q Consensus 248 ~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd~gdvHfVQ~NYpsy~~V~~n~~~ 327 (475)
.+. ....+..-+. .+ +.-...+.-.-++++|+-+++..+.. .+
T Consensus 101 ---------------~~~----------~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~ldt~~~~~-----~~ 143 (302)
T d1utea_ 101 ---------------AYS----------KISKRWNFPS----PY---YRLRFKIPRSNVSVAIFMLDTVTLCG-----NS 143 (302)
T ss_dssp ---------------HGG----------GTSTTEECCS----SS---EEEEEECTTSSCEEEEEECCHHHHHC-----CG
T ss_pred ---------------CHH----------HCCCCCCCCC----CC---CCEEECCCCCCCCEEEEECCCEEEEE-----CC
T ss_conf ---------------300----------0254555888----66---44010566889857999826625761-----23
Q ss_pred CHHHHHHHHHCCCCCCEEEEEECCCCH----HHHHHHHHHHCCCCCCEEEEECCCCC-----CCHHHHHHHHHHHHHHHC
Q ss_conf 001222210002565113432056557----78878888840347957999500477-----200389999999999858
Q gi|254780291|r 328 SNIFTVAVPEHISKQDLPSHVSNGSEI----SQWIRDDVFQAQREGKYIILFADDID-----RFSSIDQKRMFEKFLTQS 398 (475)
Q Consensus 328 ~~af~Iqv~n~Id~q~l~s~Vn~~~~i----skWL~~DL~~A~~~gK~IILN~HD~~-----~~sSi~~KrmFks~itk~ 398 (475)
. ..............+ .+||+++|..+.+ +..|+.+|... +.........|+.++.++
T Consensus 144 ~-----------~~~~~~~~~~~~~~~~~~Q~~WL~~~L~~~~~--~~~iv~~h~~~~~~~~~~~~~~~~~~~~~ll~~~ 210 (302)
T d1utea_ 144 D-----------DFVSQQPERPRNLALARTQLAWIKKQLAAAKE--DYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTH 210 (302)
T ss_dssp G-----------GSTTCSCCSCSCHHHHHHHHHHHHHHHHHCCC--SEEEEECSSCSSCCSSSCCCHHHHHHTHHHHHHT
T ss_pred C-----------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC--CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 4-----------43444666544410589999999999874114--7648999424445677777556666666778745
Q ss_pred CCCEEEEEEEECCCCCCCC-CC-------C---------------CCEEEEEEECCCCCCCEEEEEECCCEEEEEEEECC
Q ss_conf 9617999864236765246-55-------5---------------31013897045646718999964885999998516
Q gi|254780291|r 399 KISTIFTTRFTSSPESYIK-DS-------T---------------GRPVRVYNINKNSKNEFILLEMTPHYINVTAYERR 455 (475)
Q Consensus 399 nV~AIF~aH~Hqshe~~le-c~-------~---------------GykVPvy~iGSvpkNrF~~lem~~~~atITgY~~R 455 (475)
+|.++|.||.|.- +++.. +. . ....++.........-|..+++++..++++-|++.
T Consensus 211 ~v~~~~~GH~H~~-~r~~~~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~v~~~~l~~~~~~~~ 289 (302)
T d1utea_ 211 KVTAYLCGHDHNL-QYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSVTYIEAS 289 (302)
T ss_dssp TCSEEEECSSSSE-EEEECTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEECSSCEEEEEEETT
T ss_pred CCEEEEECCCCCE-EEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCEEEEEEEECC
T ss_conf 9539983797325-777459963799849887778886555668875542254056786638999998999999999698
Q ss_pred CCC
Q ss_conf 763
Q gi|254780291|r 456 GKV 458 (475)
Q Consensus 456 d~t 458 (475)
+.+
T Consensus 290 G~~ 292 (302)
T d1utea_ 290 GKS 292 (302)
T ss_dssp SCE
T ss_pred CCE
T ss_conf 989
No 5
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]}
Probab=99.01 E-value=4.6e-09 Score=76.63 Aligned_cols=191 Identities=14% Similarity=0.257 Sum_probs=108.9
Q ss_pred EEEEECCCEEC---------CC-HHHHHHHHHHHH-CCCEEEEEEECCCCCCCCHHHHHHHHHHH-CCCCCEEECCCCCC
Q ss_conf 15551331004---------63-146889998861-16567897605100121267788888672-65575130245544
Q gi|254780291|r 162 IAVIADPWYKA---------DT-PMFVEAINSLKS-SKNIILGILTGDMTQSSTTKELKRFYNIY-SLKFPFFRGLGSQE 229 (475)
Q Consensus 162 ~~~~~~pw~k~---------~~-~~~vesinsl~~-~~~~~~gIINGDLTeFG~q~qL~eFr~Vw-nl~iPv~lGLGNHD 229 (475)
||.|+|.-+.. ++ ..+.+.++.+.. ..+.-+=|+.||||+.|...+++.|++.. .+++|+|.-.||||
T Consensus 3 i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~~~~y~~~~~~l~~l~~p~~~i~GNHD 82 (271)
T d3d03a1 3 LAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGNHD 82 (271)
T ss_dssp EEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSSCEEEECCTTS
T ss_pred EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 99991575798864202676899999999999983589999999895467288422689999987505998999936864
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEE
Q ss_conf 47888766745455000003688899999999877655566654210010013444565521037775443343027335
Q gi|254780291|r 230 YIGNRPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWNIDNVH 309 (475)
Q Consensus 230 YqNN~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd~gdvH 309 (475)
+..+ |.+...++... ...+ .+...|+-+.+.++
T Consensus 83 ~~~~-----------------------~~~~~~~~~~~------~~~~------------------~~~~~~~~~~~~~~ 115 (271)
T d3d03a1 83 DKAL-----------------------FLEYLQPLCPQ------LGSD------------------ANNMRCAVDDFATR 115 (271)
T ss_dssp CHHH-----------------------HHHHHGGGSGG------GCSC------------------GGGCCEEECSSSSE
T ss_pred CHHH-----------------------HHHHHHHHHHC------CCCC------------------CCCCEEEEECCCEE
T ss_conf 2678-----------------------88876665420------3334------------------57633799438747
Q ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCC------CH
Q ss_conf 554036410367516753001222210002565113432056557788788888403479579995004772------00
Q gi|254780291|r 310 FIQANYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKYIILFADDIDR------FS 383 (475)
Q Consensus 310 fVQ~NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~IILN~HD~~~------~s 383 (475)
++-++-..... ..++. .-+-.+||++.|.++. ++++++.+|-.+- +.
T Consensus 116 ~i~ldt~~~~~---~~~~l----------------------~~~ql~wL~~~L~~~~--~~~~iv~~Hh~p~~~~~~~~d 168 (271)
T d3d03a1 116 LLFIDSSRAGT---SKGWL----------------------TDETISWLEAQLFEGG--DKPATIFMHHPPLPLGNAQMD 168 (271)
T ss_dssp EEECCCCCTTC---SSBCC----------------------CHHHHHHHHHHHHHHT--TSCEEEEESSCSSCCSCTTTG
T ss_pred EEECCCCCCCC---CCCEE----------------------CHHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCCC
T ss_conf 98425565898---76412----------------------3999989999876413--640599954675356865444
Q ss_pred --HHHHHHHHHHHHHHC-CCCEEEEEEEECCCCCCCCCCCCCEEEEEEECC
Q ss_conf --389999999999858-961799986423676524655531013897045
Q gi|254780291|r 384 --SIDQKRMFEKFLTQS-KISTIFTTRFTSSPESYIKDSTGRPVRVYNINK 431 (475)
Q Consensus 384 --Si~~KrmFks~itk~-nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGS 431 (475)
.......|.+.+.++ +|.++|.||.|....... ..+|++...|
T Consensus 169 ~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~-----~g~~~~~~ps 214 (271)
T d3d03a1 169 PIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQY-----RQALISTLPG 214 (271)
T ss_dssp GGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEE-----TTEEEEECCC
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHCEEE-----CCEEEEECCC
T ss_conf 434335478999997347847998277563460599-----9999998487
No 6
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}
Probab=98.68 E-value=3.4e-07 Score=64.33 Aligned_cols=217 Identities=10% Similarity=0.094 Sum_probs=120.4
Q ss_pred CCCEEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCH-HHHHHHHHHH-CCCCCEEECCCCCCCCCCCCC
Q ss_conf 15515551331004631468899988611656789760510012126-7788888672-655751302455444788876
Q gi|254780291|r 159 HKGIAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSSTT-KELKRFYNIY-SLKFPFFRGLGSQEYIGNRPC 236 (475)
Q Consensus 159 ~~~~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q-~qL~eFr~Vw-nl~iPv~lGLGNHDYqNN~dC 236 (475)
-+.|+++.|. -.|.+.+ |++-.+.....+-+=|+.|||++.|.. .+..+|.... .+++|+|.=.||||....
T Consensus 5 ~~~i~~~sd~--hg~~eal-e~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~--- 78 (228)
T d1uf3a_ 5 VRYILATSNP--MGDLEAL-EKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIW--- 78 (228)
T ss_dssp CCEEEEEECC--TTCHHHH-HHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSCSHH---
T ss_pred CCEEEEEECC--CCCHHHH-HHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHH---
T ss_conf 4389999578--8999999-999998766198999989999999764168997554320345369999668874432---
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEECCC
Q ss_conf 67454550000036888999999998776555666542100100134445655210377754433430273355540364
Q gi|254780291|r 237 RDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWNIDNVHFIQANYS 316 (475)
Q Consensus 237 ~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd~gdvHfVQ~NYp 316 (475)
.....+. .. . ......... -..+.+..+++-++.....
T Consensus 79 -----------~~~~~~~----~~--~----------~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~ 116 (228)
T d1uf3a_ 79 -----------EYLREAA----NV--E----------LVHPEMRNV---------------HETFTFWRGPYLVAGVGGE 116 (228)
T ss_dssp -----------HHHHHHH----HH--H----------HHCTTEEEC---------------BTSEEEETTTEEEEEECSE
T ss_pred -----------HHHHHHC----CC--C----------CCCCCCCCC---------------CEEEEECCCCEEEEECCCC
T ss_conf -----------1235532----53--2----------134421001---------------2034432687799960776
Q ss_pred CEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH--HHHHHHHH
Q ss_conf 1036751675300122221000256511343205655778878888840347957999500477200389--99999999
Q gi|254780291|r 317 MFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKYIILFADDIDRFSSID--QKRMFEKF 394 (475)
Q Consensus 317 sy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~IILN~HD~~~~sSi~--~KrmFks~ 394 (475)
...- ... .............+|+.+.+.. ....+.|+-+|..+...... .-..+.+.
T Consensus 117 ~~~~----~~~---------------~~~~~~~~~~~~~~~l~~~l~~--~~~~~~il~~H~p~~~~~~~~~~~~~~~~~ 175 (228)
T d1uf3a_ 117 IADE----GEP---------------EEHEALRYPAWVAEYRLKALWE--LKDYPKIFLFHTMPYHKGLNEQGSHEVAHL 175 (228)
T ss_dssp EESS----SCC---------------BSSSSCEEEHHHHHHHHGGGGG--SCSCCEEEEESSCBCBTTTBTTSBHHHHHH
T ss_pred CCCC----CCC---------------CHHHHHHHHHHHHHHHHHHHHH--CCCCCEEEEEEEECCCCCCCCCCCHHHHHH
T ss_conf 5567----674---------------0334333357789999998753--247766999840015752100040989987
Q ss_pred HHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCEEEEE
Q ss_conf 98589617999864236765246555310138970456467189999648859999
Q gi|254780291|r 395 LTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNSKNEFILLEMTPHYINVT 450 (475)
Q Consensus 395 itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvpkNrF~~lem~~~~atIT 450 (475)
++.+++..++.||.|+..+ .. +...+++.|++..|+|.++|+.++.+.+.
T Consensus 176 ~~~~~~~lvl~GH~H~~~~-----~~-g~~~~v~pG~~~~g~y~~i~~~~~~ie~~ 225 (228)
T d1uf3a_ 176 IKTHNPLLVLVAGKGQKHE-----ML-GASWVVVPGDLSEGEYSLLDLRARKLETG 225 (228)
T ss_dssp HHHHCCSEEEECCSSCEEE-----EE-TTEEEEECCBGGGTEEEEEETTTTEEEEE
T ss_pred HHHCCCCEEEECCCCCCHH-----CC-CCEEEEECCCCCCCEEEEEECCCCEEEEE
T ss_conf 8741984999846456640-----20-98799978854456089998259889988
No 7
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.39 E-value=7e-06 Score=55.64 Aligned_cols=83 Identities=8% Similarity=0.085 Sum_probs=60.5
Q ss_pred HCCCCCCEEEEECCCCCCCHHH---------HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 4034795799950047720038---------9999999999858961799986423676524655531013897045646
Q gi|254780291|r 364 QAQREGKYIILFADDIDRFSSI---------DQKRMFEKFLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNSK 434 (475)
Q Consensus 364 ~A~~~gK~IILN~HD~~~~sSi---------~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvpk 434 (475)
.++..+.+.|+-+|..+..+.. ..-.-+.+.++.+++..++-||.|.... ..++..++|.||+..
T Consensus 165 ~~~~~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~~------~~g~~~~~~pGs~~~ 238 (257)
T d2yvta1 165 VNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHE------LVGNTIVVNPGEFEE 238 (257)
T ss_dssp GGGSCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEEE------EETTEEEEECCBGGG
T ss_pred HHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEE------ECCCEEEEECCCCCC
T ss_conf 64303414799870332366433354300112357888766522983999973138869------639839998985424
Q ss_pred CCEEEEEECCCEEEEEEE
Q ss_conf 718999964885999998
Q gi|254780291|r 435 NEFILLEMTPHYINVTAY 452 (475)
Q Consensus 435 NrF~~lem~~~~atITgY 452 (475)
++|..+|.+...+.+--+
T Consensus 239 g~y~~id~~~~~i~~~~~ 256 (257)
T d2yvta1 239 GRYAFLDLTQHKIKLEQF 256 (257)
T ss_dssp TEEEEEETTTTEEEEEEC
T ss_pred CEEEEEEEECCEEEEEEC
T ss_conf 879999981998999977
No 8
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=97.45 E-value=7.4e-05 Score=48.89 Aligned_cols=60 Identities=18% Similarity=0.276 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCCCCH--HHHHHHHHHH----CCCCCEEECCCCCCCCCCCC
Q ss_conf 468899988611656789760510012126--7788888672----65575130245544478887
Q gi|254780291|r 176 MFVEAINSLKSSKNIILGILTGDMTQSSTT--KELKRFYNIY----SLKFPFFRGLGSQEYIGNRP 235 (475)
Q Consensus 176 ~~vesinsl~~~~~~~~gIINGDLTeFG~q--~qL~eFr~Vw----nl~iPv~lGLGNHDYqNN~d 235 (475)
.+.+.+-....++++-+-++.|||.+.+.. ..+..+.... ..++|+|.-.||||+..+..
T Consensus 27 ~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~~i~GNHD~~~~~~ 92 (333)
T d1ii7a_ 27 EAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHDRTQRGP 92 (333)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEEECCTTTCCSSSC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH
T ss_conf 999999999987399999987898889979999999999997668753980999678876632204
No 9
>d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]}
Probab=91.86 E-value=0.37 Score=24.48 Aligned_cols=63 Identities=11% Similarity=0.161 Sum_probs=47.1
Q ss_pred HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCC----------CEEEEEECCCEEEEEEEECCCC
Q ss_conf 9999998589617999864236765246555310138970456467----------1899996488599999851676
Q gi|254780291|r 390 MFEKFLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNSKN----------EFILLEMTPHYINVTAYERRGK 457 (475)
Q Consensus 390 mFks~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvpkN----------rF~~lem~~~~atITgY~~Rd~ 457 (475)
.+..+....++..+|.||-|...-. ... ..-++|-||+.-. -|-++|++...+++..|+-.++
T Consensus 110 ~l~~~~~~~~~dvvi~GHTH~~~~~---~~~--g~~~iNPGSvg~pr~~~~~~~~~syaild~~~~~v~v~~y~l~~~ 182 (193)
T d2a22a1 110 SLEQWQRRLDCDILVTGHTHKLRVF---EKN--GKLFLNPGTATGAFSALTPDAPPSFMLMALQGNKVVLYVYDLRDG 182 (193)
T ss_dssp HHHHHHHHHTCSEEEECSSCCCEEE---EET--TEEEEECCCSSCCCCTTSTTCCCEEEEEEEETTEEEEEEEEEETT
T ss_pred HHHHHHHHCCCCEEEECCCCCCEEE---EEC--CEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEEECCC
T ss_conf 9999876248998998675675389---999--999998997776767888898888999999899999999991299
No 10
>d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.10 E-value=1.4 Score=20.66 Aligned_cols=60 Identities=12% Similarity=0.153 Sum_probs=44.4
Q ss_pred HHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCC--CC--------CEEEEEECCCEEEEEEEECCCCC
Q ss_conf 9985896179998642367652465553101389704564--67--------18999964885999998516763
Q gi|254780291|r 394 FLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNS--KN--------EFILLEMTPHYINVTAYERRGKV 458 (475)
Q Consensus 394 ~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvp--kN--------rF~~lem~~~~atITgY~~Rd~t 458 (475)
.....+...+|.||-|... ++.. ...-++|-||+. ++ -|.++|++....+++-|+..++.
T Consensus 102 ~~~~~~~divi~GHTH~p~---~~~~--~~~~~iNPGSv~~pr~~~~~~~~~syaild~~~~~v~~~~~~l~~~~ 171 (182)
T d1z2wa1 102 LQRQFDVDILISGHTHKFE---AFEH--ENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDD 171 (182)
T ss_dssp HHHHHSSSEEECCSSCCCE---EEEE--TTEEEEECCCTTCCCCSSCSCCCCEEEEEEEETTEEEEEEEEEETTE
T ss_pred HHHCCCCCEEEECCCCCCE---EEEE--CCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEEECCCC
T ss_conf 8762579979978767634---9998--99999969988888888888877779999980999999999942992
No 11
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=81.57 E-value=1.5 Score=20.54 Aligned_cols=48 Identities=13% Similarity=0.072 Sum_probs=32.8
Q ss_pred HCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCC-------CCCEEEEEECCCEEEE
Q ss_conf 5896179998642367652465553101389704564-------6718999964885999
Q gi|254780291|r 397 QSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNS-------KNEFILLEMTPHYINV 449 (475)
Q Consensus 397 k~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvp-------kNrF~~lem~~~~atI 449 (475)
..+...+|.||.|...... .....+++.||+- +..|.++|.+....++
T Consensus 164 ~~~~d~vv~GHtH~~~~~~-----~~~~~~in~Gsvg~~~~g~~~~~y~i~d~~~~~~~~ 218 (251)
T d1nnwa_ 164 VKDYEMLIVASPMYPVDAM-----TRYGRVVCPGSVGFPPGKEHKATFALVDVDTLKPKF 218 (251)
T ss_dssp GTTSSEEEESTTCSEEEEE-----ETTEEEEEECCSSSCSSSSCCEEEEEEETTTCCEEE
T ss_pred CCCCEEEEEECCCEEEEEE-----EEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEE
T ss_conf 5685089981460478888-----640011356610146789987769999858986999
No 12
>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=73.18 E-value=2.5 Score=18.99 Aligned_cols=60 Identities=10% Similarity=0.119 Sum_probs=43.1
Q ss_pred HHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCC-------CCCEEEEEECCCEEEEEEEECCCC
Q ss_conf 99985896179998642367652465553101389704564-------671899996488599999851676
Q gi|254780291|r 393 KFLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNS-------KNEFILLEMTPHYINVTAYERRGK 457 (475)
Q Consensus 393 s~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvp-------kNrF~~lem~~~~atITgY~~Rd~ 457 (475)
+.....+..-|+.||-|...-.. . ..+-++|-||+. ...|-++|++....+++-|..-..
T Consensus 96 ~~~~~~~~dvvi~GHTH~p~~~~---~--~~~~~iNPGSvg~pr~~~~~~syail~~~~~~~~v~~~~~d~~ 162 (173)
T d3ck2a1 96 YWAQEEEAAICLYGHLHVPSAWL---E--GKILFLNPGSISQPRGTIRECLYARVEIDDSYFKVDFLTRDHE 162 (173)
T ss_dssp HHHHHTTCSEEECCSSCCEEEEE---E--TTEEEEEECCSSSCCTTCCSCCEEEEEECSSEEEEEEECTTSC
T ss_pred HHHHHCCCCEEEECCCCCCEEEE---E--CCEEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEEEEECCE
T ss_conf 99875599999968867515999---8--9999997799877789998778999998099999999975890
No 13
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]}
Probab=71.81 E-value=2.7 Score=18.79 Aligned_cols=54 Identities=9% Similarity=0.007 Sum_probs=37.3
Q ss_pred HHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCC-----CCEEEEEECCCEEEE
Q ss_conf 99999858961799986423676524655531013897045646-----718999964885999
Q gi|254780291|r 391 FEKFLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNSK-----NEFILLEMTPHYINV 449 (475)
Q Consensus 391 Fks~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvpk-----NrF~~lem~~~~atI 449 (475)
.+.+.+..++..++.||-|..... .. ...-++|-||+.. .-|-++|.+..+.+.
T Consensus 104 ~~~~~~~~~~d~v~~GHtH~~~~~---~~--~~~~~iNPGSvg~p~~~~~s~~ild~~~~~~~~ 162 (165)
T d1s3la_ 104 LEMAIKSGLYDVVIYGHTHERVFE---EV--DDVLVINPGECCGYLTGIPTIGILDTEKKEYRE 162 (165)
T ss_dssp HHHHHHHSCCSEEEEECSSCCEEE---EE--TTEEEEECCCSSCTTTSCCEEEEEETTTTEEEE
T ss_pred HHHHHHCCCCCEEEECCCCCCEEE---EE--CCEEEEECCCCCCCCCCCCEEEEEECCCCEEEE
T ss_conf 888864479889998986850599---99--999999899988889999889999916996999
No 14
>d1v77a_ c.6.3.2 (A:) Ribonuclease P protein component 3, Rnp3 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=52.05 E-value=5.1 Score=16.94 Aligned_cols=81 Identities=21% Similarity=0.313 Sum_probs=59.9
Q ss_pred CCCCCCEEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCC---CCCHHHHHHHHHHH----CCCCCEEECCCCC
Q ss_conf 2201551555133100463146889998861165678976051001---21267788888672----6557513024554
Q gi|254780291|r 156 NCHHKGIAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQ---SSTTKELKRFYNIY----SLKFPFFRGLGSQ 228 (475)
Q Consensus 156 ~~~~~~~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTe---FG~q~qL~eFr~Vw----nl~iPv~lGLGNH 228 (475)
-|.. ++-+++-||..-....|-+....+-..++++|.|-++.+.. ..+.+.+..++.++ ..++|+..+-|-|
T Consensus 86 A~e~-~VDiL~~p~~~r~~~~~~hvlak~A~e~gV~lEI~~s~ll~~~~~~R~~~i~~~~~~l~l~kky~~piVisSdAh 164 (202)
T d1v77a_ 86 SIEK-GVDAIISPWVNRKDPGIDHVLAKLMVKKNVALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVRRFLTSSAQ 164 (202)
T ss_dssp HHHT-TCSEEECTTTTSSSCSCCHHHHHHHHHHTCEEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCS
T ss_pred HHHC-CCCEEECCCCCCCCCCCCHHHHHHHHHCCEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 9817-962994576345755315899999997791899975254246853289999989999999986499689845999
Q ss_pred CCCCCCCCCCCC
Q ss_conf 447888766745
Q gi|254780291|r 229 EYIGNRPCRDPY 240 (475)
Q Consensus 229 DYqNN~dC~~P~ 240 (475)
.= .+++.|.
T Consensus 165 ~~---~dlr~p~ 173 (202)
T d1v77a_ 165 EK---WDVRYPR 173 (202)
T ss_dssp SG---GGCCCHH
T ss_pred CH---HHCCCHH
T ss_conf 80---1218999
No 15
>d1zzoa1 c.47.1.10 (A:45-178) Lipoprotein DsbF {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=46.86 E-value=7.3 Score=15.93 Aligned_cols=31 Identities=3% Similarity=0.076 Sum_probs=14.2
Q ss_pred CEEEEEECCCEEEEEEEECCCCCHHHHHHCC
Q ss_conf 1899996488599999851676367875246
Q gi|254780291|r 436 EFILLEMTPHYINVTAYERRGKVPHITRKMS 466 (475)
Q Consensus 436 rF~~lem~~~~atITgY~~Rd~tPhi~ekl~ 466 (475)
.++++|-++.-..+.|.--.+.+.+.+++||
T Consensus 104 ~~~iiD~~G~i~~~~g~~~~~~l~~~i~~Lt 134 (134)
T d1zzoa1 104 AYAFVDPHGNVDVVRGRMSQDELTRRVTALT 134 (134)
T ss_dssp EEEEECTTCCEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEEECCCCEEEEEECCCCHHHHHHHHHHHC
T ss_conf 6999989984999989999999999999649
No 16
>d2j07a2 c.28.1.1 (A:2-171) DNA photolyase {Thermus thermophilus [TaxId: 274]}
Probab=32.69 E-value=6.9 Score=16.09 Aligned_cols=18 Identities=6% Similarity=0.104 Sum_probs=7.7
Q ss_pred HHHHHHHHCCCCEEEEEE
Q ss_conf 999999858961799986
Q gi|254780291|r 390 MFEKFLTQSKISTIFTTR 407 (475)
Q Consensus 390 mFks~itk~nV~AIF~aH 407 (475)
.|+++++++++.+||..+
T Consensus 77 ~l~~l~~~~~i~~V~~n~ 94 (170)
T d2j07a2 77 KVPEAARRLKAKAVYALT 94 (170)
T ss_dssp HHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHC
T ss_conf 899999985256777641
No 17
>d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.33 E-value=8.2 Score=15.58 Aligned_cols=21 Identities=14% Similarity=0.257 Sum_probs=18.2
Q ss_pred HHHHHHHCCCCCCEEEEECCC
Q ss_conf 788888403479579995004
Q gi|254780291|r 358 IRDDVFQAQREGKYIILFADD 378 (475)
Q Consensus 358 L~~DL~~A~~~gK~IILN~HD 378 (475)
++.-|.+|+.+||+++++|.-
T Consensus 14 ~~~al~~A~~~~Kpvlv~F~a 34 (135)
T d1sena_ 14 LEDGKKEAAASGLPLMVIIHK 34 (135)
T ss_dssp HHHHHHHHHHHTCCEEEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEEEE
T ss_conf 999999999819969999972
No 18
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]}
Probab=30.00 E-value=13 Score=14.21 Aligned_cols=10 Identities=20% Similarity=0.365 Sum_probs=3.3
Q ss_pred ECCCEEEEEE
Q ss_conf 6488599999
Q gi|254780291|r 442 MTPHYINVTA 451 (475)
Q Consensus 442 m~~~~atITg 451 (475)
++++.++|.+
T Consensus 82 id~H~~~Via 91 (168)
T d1v10a2 82 IDGHRMTVIE 91 (168)
T ss_dssp ETTCCEEEEE
T ss_pred ECCCEEEEEE
T ss_conf 7998089997
No 19
>d1b4ra_ b.1.3.1 (A:) Polycystein-1, PKD-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.89 E-value=9.5 Score=15.16 Aligned_cols=12 Identities=8% Similarity=0.396 Sum_probs=9.1
Q ss_pred EEEEEEECCCEE
Q ss_conf 443343027335
Q gi|254780291|r 298 SQSYSWNIDNVH 309 (475)
Q Consensus 298 SLSYSWd~gdvH 309 (475)
..+|.|||||--
T Consensus 26 ~~~y~WdFGDG~ 37 (80)
T d1b4ra_ 26 VTATRWDFGDGS 37 (80)
T ss_dssp CSEEEEECCSSC
T ss_pred CCEEEEEECCCC
T ss_conf 528999947998
No 20
>d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=27.82 E-value=6.7 Score=16.17 Aligned_cols=16 Identities=13% Similarity=-0.024 Sum_probs=6.1
Q ss_pred HHHEECCCCCCCHHHH
Q ss_conf 2100000122103331
Q gi|254780291|r 42 NILYHRASIEASADEA 57 (475)
Q Consensus 42 ~~~~~~~~~~~~~~~~ 57 (475)
.++--|+.+-.+.-+-
T Consensus 12 ~il~~Rs~i~~~iR~f 27 (293)
T d1nnha_ 12 PTLDIQTKILEYMTDF 27 (293)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999999
No 21
>d1wgoa_ b.1.3.1 (A:) VPS10 domain-containing receptor SorCS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.62 E-value=9.2 Score=15.26 Aligned_cols=12 Identities=8% Similarity=0.304 Sum_probs=9.3
Q ss_pred EEEEEEECCCEE
Q ss_conf 443343027335
Q gi|254780291|r 298 SQSYSWNIDNVH 309 (475)
Q Consensus 298 SLSYSWd~gdvH 309 (475)
+.+|.|||||=.
T Consensus 61 ~tsy~WDFGDG~ 72 (123)
T d1wgoa_ 61 TTKYQVDLGDGF 72 (123)
T ss_dssp SCEEEEECSSSC
T ss_pred EEEEEEECCCCC
T ss_conf 368999978998
No 22
>d1jnia_ a.138.1.3 (A:) Periplasmic nitrate reductase subunit NapB {Haemophilus influenzae [TaxId: 727]}
Probab=26.15 E-value=4.3 Score=17.46 Aligned_cols=26 Identities=35% Similarity=0.715 Sum_probs=22.4
Q ss_pred HCCCC-CCCEEEEEEHHHCCCCCCCEE
Q ss_conf 23333-686089980542022015515
Q gi|254780291|r 138 LLPHK-QNMDIVVDVNKILNCHHKGIA 163 (475)
Q Consensus 138 ~~~~~-~~~~~~~~~~~~~~~~~~~~~ 163 (475)
|.||+ ..|.|-.+.|+-|.||-...|
T Consensus 5 lIPH~i~gy~It~~~N~Cl~CH~~~~a 31 (68)
T d1jnia_ 5 MVPHSVANYQVTKNVNQCLNCHSPENS 31 (68)
T ss_dssp CCSSCCTTCCEETTEETTHHHHSTTTH
T ss_pred CCCCCCCCCEECCCCCCCCCCCCHHHH
T ss_conf 578235686521799827548698678
No 23
>d1l0qa1 b.1.3.1 (A:302-391) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=25.62 E-value=9.9 Score=15.05 Aligned_cols=15 Identities=7% Similarity=0.426 Sum_probs=11.2
Q ss_pred EEEEEEEEECCCEEE
Q ss_conf 754433430273355
Q gi|254780291|r 296 SGSQSYSWNIDNVHF 310 (475)
Q Consensus 296 ~GSLSYSWd~gdvHf 310 (475)
.|..+|.|+|||-..
T Consensus 30 ~~~~sy~W~FGdG~~ 44 (90)
T d1l0qa1 30 KDATEWKWDFGDGSS 44 (90)
T ss_dssp BSCSEEEEECSSSCE
T ss_pred CCCCEEEEEECCCCC
T ss_conf 994489999589971
No 24
>d1ogyb_ a.138.1.3 (B:) Periplasmic nitrate reductase subunit NapB {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=23.51 E-value=6 Score=16.47 Aligned_cols=26 Identities=27% Similarity=0.712 Sum_probs=21.2
Q ss_pred HCCCCC-CCEEEEEEHHHCCCCCCCEE
Q ss_conf 233336-86089980542022015515
Q gi|254780291|r 138 LLPHKQ-NMDIVVDVNKILNCHHKGIA 163 (475)
Q Consensus 138 ~~~~~~-~~~~~~~~~~~~~~~~~~~~ 163 (475)
+.||+- .|.|-.+.|+-|.||-...|
T Consensus 40 lIPH~iegy~It~~~N~Cl~CH~~~~a 66 (127)
T d1ogyb_ 40 VIPHSIEGYQLSVNANRCLECHRRQYS 66 (127)
T ss_dssp CBCSCCTTCCBSSSCBGGGGTSCCCCT
T ss_pred CCCCCCCCCEEECCCCCCCCCCCHHHH
T ss_conf 787246785550799816658696357
No 25
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]}
Probab=23.42 E-value=17 Score=13.44 Aligned_cols=51 Identities=16% Similarity=0.163 Sum_probs=30.7
Q ss_pred HHHHHHHHHCCCCCCEEEEEC--CC-CC-C-CHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 887888884034795799950--04-77-2-0038999999999985896179998
Q gi|254780291|r 356 QWIRDDVFQAQREGKYIILFA--DD-ID-R-FSSIDQKRMFEKFLTQSKISTIFTT 406 (475)
Q Consensus 356 kWL~~DL~~A~~~gK~IILN~--HD-~~-~-~sSi~~KrmFks~itk~nV~AIF~a 406 (475)
.++.+....+.+.++|+++.= .. ++ . ........-|-+++.++++.-++-+
T Consensus 200 ~~~~~~~~~~~~~~~Pv~vgEfG~~~~~~~~~~~~~~~~~~~~~~~~~~i~w~~W~ 255 (291)
T d1egza_ 200 ESLRNKARQALNNGIALFVTEWGTVNADGNGGVNQTETDAWVTFMRDNNISNANWA 255 (291)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESSCTTSCSCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 56899999998738976841268755678777698999999999998598589983
No 26
>d1e42a2 d.105.1.1 (A:825-937) Beta2-adaptin AP2, C-terminal subdomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.72 E-value=18 Score=13.35 Aligned_cols=22 Identities=32% Similarity=0.454 Sum_probs=18.4
Q ss_pred CEEE----EEEECCCCCCCEEEEEEC
Q ss_conf 1013----897045646718999964
Q gi|254780291|r 422 RPVR----VYNINKNSKNEFILLEMT 443 (475)
Q Consensus 422 ykVP----vy~iGSvpkNrF~~lem~ 443 (475)
++++ +|++++++||-..++|++
T Consensus 55 R~~~gq~~lYfS~K~~n~i~~L~El~ 80 (113)
T d1e42a2 55 RNVEGQDMLYQSLKLTNGIWILAELR 80 (113)
T ss_dssp EEETTEEEEEEEEEBTTSCEEEEEEE
T ss_pred ECCCCCEEEEEEEECCCCCEEEEEEE
T ss_conf 35899768999988479978999999
No 27
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]}
Probab=22.60 E-value=18 Score=13.34 Aligned_cols=66 Identities=12% Similarity=0.151 Sum_probs=37.5
Q ss_pred EEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHH------HHHHHH-CCCCCEEECCCCCCC
Q ss_conf 155513310046314688999886116567897605100121267788------888672-655751302455444
Q gi|254780291|r 162 IAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSSTTKELK------RFYNIY-SLKFPFFRGLGSQEY 230 (475)
Q Consensus 162 ~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q~qL~------eFr~Vw-nl~iPv~lGLGNHDY 230 (475)
|++|+|-- .+.+-+ +++-....+.++-.=|..||+...|...... +..... .++.|++.=.||||.
T Consensus 4 i~iiSDiH--g~~~al-~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNhD~ 76 (184)
T d1su1a_ 4 LMFASDIH--GSLPAT-ERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDS 76 (184)
T ss_dssp EEEECCCT--TBHHHH-HHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCC
T ss_pred EEEEEECC--CCHHHH-HHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 99995158--998999-99999885569989999276024576303443027599999987569958996477770
No 28
>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.98 E-value=9.9 Score=15.04 Aligned_cols=32 Identities=19% Similarity=0.392 Sum_probs=13.8
Q ss_pred EEEECCCCCCCCHHHHHHHHHHH----CCCCCEEECCC
Q ss_conf 97605100121267788888672----65575130245
Q gi|254780291|r 193 GILTGDMTQSSTTKELKRFYNIY----SLKFPFFRGLG 226 (475)
Q Consensus 193 gIINGDLTeFG~q~qL~eFr~Vw----nl~iPv~lGLG 226 (475)
..|++|.++|--. +.+|.+.- +.-||.++.|.
T Consensus 126 ~MI~~df~~yPeh--R~~ff~LL~~i~~~cf~~ll~lp 161 (321)
T d1w9ca_ 126 NMINKDFEEYPEH--RTNFFLLLQAVNSHCFPAFLAIP 161 (321)
T ss_dssp HHHSSTTTCSHHH--HHHHHHHHHHHHHHCTTHHHHSC
T ss_pred HHHHCCCHHCHHH--HHHHHHHHHHHHHHCHHHHHCCC
T ss_conf 9986322008098--99999999999997889998499
Done!