HHsearch alignment for GI: 254780292 and conserved domain: CHL00159

>CHL00159 rpl13 ribosomal protein L13; Validated.
Probab=100.00  E-value=0  Score=420.57  Aligned_cols=143  Identities=50%  Similarity=0.863  Sum_probs=140.7

Q ss_pred             CCEEEECCHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCC
Q ss_conf             95113268436020069997898745767999999984656521034556688899975101001560121133331157
Q gi|254780292|r    1 MIPTFFQKSSEVEKKWILVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINASKVAFSGKKYDQKTYYRHTG   80 (155)
Q Consensus         1 ~~kT~~~k~~~~~r~W~iiDA~~~~lGRlAs~iA~~L~GKhKp~y~P~~d~GD~VvViNa~ki~~tG~K~~~k~y~~htg   80 (155)
T Consensus         1 m~kT~~~~~~~~~r~W~viDA~~~~lGRLAs~iA~~L~GK~Kp~ytP~~d~GD~VVViNa~ki~~TG~K~~~K~y~~htg   80 (143)
T CHL00159          1 MNKTFIPSKNYKKRKWYIIDAKDQKLGRLATEISSLLRGKNKPSYTPSVDTGDYVIVINADKIIVTGNKNTQKFYVRHSG   80 (143)
T ss_pred             CCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECHHEEEECCCCCCEEEEEEEE
T ss_conf             97433188202466689996999944889999999975478773567887799999983714187177300108899876


Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCEEEEH
Q ss_conf             5576336302000012487999999997308998547899962701078999713208547616
Q gi|254780292|r   81 YPGGIKKTTAKEILAGASPTNILKKAIARMLPRGPLARKQMKNLHIYAEDHHPHEAQKPVFMDI  144 (155)
Q Consensus        81 ypGG~k~~~~~~~~~~~~P~~il~~aV~gMLPkn~lgr~~lkrL~vy~g~~Hph~aq~P~~l~~  144 (155)
T Consensus        81 ypGg~k~~~~~~~~-~r~P~~il~~AVkgMLPkn~lgr~~lkrLkVy~G~~Hph~aQ~P~~l~i  143 (143)
T CHL00159         81 RPGGLKVETFKELQ-NRLPNRIIEKAVKGMLPKGPLGRKLFKKLKVYAGSSHPHEAQKPIIINI  143 (143)
T ss_pred             CCCCCCCCCHHHHH-HCCCHHHHHHHHHHCCCCCHHHHHHHHCCEEECCCCCCCCCCCCEEECC
T ss_conf             25887565678964-2280579999998618998129999858888698999855689877279