HHsearch alignment for GI: 254780292 and conserved domain: PRK06394
>PRK06394 rpl13p 50S ribosomal protein L13P; Reviewed.
Probab=100.00 E-value=1.4e-41 Score=264.75 Aligned_cols=125 Identities=28% Similarity=0.381 Sum_probs=113.1
Q ss_pred EEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHH-HHHHHCCCCCCCCEEEECCCCCC
Q ss_conf 99978987457679999999846565210345566888999751010015601211-33331157557633630200001
Q gi|254780292|r 17 ILVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINASKVAFSGKKYDQ-KTYYRHTGYPGGIKKTTAKEILA 95 (155)
Q Consensus 17 ~iiDA~~~~lGRlAs~iA~~L~GKhKp~y~P~~d~GD~VvViNa~ki~~tG~K~~~-k~y~~htgypGG~k~~~~~~~~~ 95 (155)
T Consensus 2 ivIDA~~~vlGRLAs~vAk~L~g------------Gd~ViVINAeKi~iTG~K~~~~~~Y~~~~~~~~~~~~~~~~~~-~ 68 (143)
T PRK06394 2 VVIDAEGAILGRLASYVAKLLLS------------GEEVVIVNAEKAVITGNREFIFEKYKQRRERKTISNPRRFGPY-Y 68 (143)
T ss_pred EEEECCCCEEHHHHHHHHHHHHC------------CCEEEEEECCCEEEECCHHHHHHHEEEECCCCCCCCCCCCCCC-C
T ss_conf 89978998808899999999858------------9979999761348846537744340453578989886212100-0
Q ss_pred CCCHHHHHHHHHHHCCC-CCHHHHHHHHCCCCCCCCCCCHHHCCCEEEEHHHCCCCCCCC
Q ss_conf 24879999999973089-985478999627010789997132085476166528131236
Q gi|254780292|r 96 GASPTNILKKAIARMLP-RGPLARKQMKNLHIYAEDHHPHEAQKPVFMDIAKMNPKNSRR 154 (155)
Q Consensus 96 ~~~P~~il~~aV~gMLP-kn~lgr~~lkrL~vy~g~~Hph~aq~P~~l~~~~~~~kn~~~ 154 (155)
T Consensus 69 ~r~P~~il~~aVrGMLP~K~~lGr~~~k~LkvY~G~ph~~~aqkp~~~~~a~~~~~~~~k 128 (143)
T PRK06394 69 PKRPDNIVKRTIRGMLPYKKDRGREAFKRLKVYVGVPKELEGKEFETIDDADVSRLSGIK 128 (143)
T ss_pred CCCHHHHHHHHHHCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCEECCHHHHHCCCCCC
T ss_conf 029599999988334899985799998498897689986356787505778850648984