HHsearch alignment for GI: 254780292 and conserved domain: PTZ00068
>PTZ00068 60S ribosomal protein L13a; Provisional.
Probab=99.92 E-value=3.2e-25 Score=168.94 Aligned_cols=119 Identities=25% Similarity=0.445 Sum_probs=92.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH-C--CCCCCCCEEEECC
Q ss_conf 069997898745767999999984656521034556688899975101001560121133331-1--5755763363020
Q gi|254780292|r 15 KWILVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINASKVAFSGKKYDQKTYYR-H--TGYPGGIKKTTAK 91 (155)
Q Consensus 15 ~W~iiDA~~~~lGRlAs~iA~~L~GKhKp~y~P~~d~GD~VvViNa~ki~~tG~K~~~k~y~~-h--tgypGG~k~~~~~ 91 (155)
T Consensus 4 k~iVIDa~ghllGRLAS~VAK~lL------------~G~kVvVVncE~i~ISG~~~r~k~ky~~~lrkr~~~n----p~~ 67 (201)
T PTZ00068 4 KIIVIDGKGHLLGRLASVVAKELL------------LGQKIVVVRCELINISGSLFRNKLKYLEFLRKRTNTN----PRR 67 (201)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHH------------CCCEEEEEECHHHEECCCHHHHHHHHHHHHHHHHCCC----CCC
T ss_conf 618996887389889999999995------------6995999962041222628999999999999987279----999
Q ss_pred CCCCCCCHHHHHHHHHHHCCC-CCHHHHHHHHCCCCCCCCCCCHHHCC----CEEEEHHHCCC
Q ss_conf 000124879999999973089-98547899962701078999713208----54761665281
Q gi|254780292|r 92 EILAGASPTNILKKAIARMLP-RGPLARKQMKNLHIYAEDHHPHEAQK----PVFMDIAKMNP 149 (155)
Q Consensus 92 ~~~~~~~P~~il~~aV~gMLP-kn~lgr~~lkrL~vy~g~~Hph~aq~----P~~l~~~~~~~ 149 (155)
T Consensus 68 GPf~~R~Ps~I~~RtVRGMLP~Kt~RG~~Al~rLkvyeGvP~pyd~~kr~vvP~Alrv~rlkp 130 (201)
T PTZ00068 68 GPFHHRAPSKIFWRVVRGMLPHKTKRGAAALKRLKVYEGVPPPYDTGKRVVVPSALRHLRLKP 130 (201)
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHHCCC
T ss_conf 999888988999998637577687679999970744258996502588678025789875289