HHsearch alignment of GI: 254780292 and MMDB domain: 2j01_N_1-63_93-140
>2j01_N (N:1-63,N:93-140) 50S ribosomal protein L13; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-45 Score=289.05 Aligned_cols=111 Identities=43% Similarity=0.867 Sum_probs=105.8
Q ss_pred CEEEECCHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 51132684360200699978987457679999999846565210345566888999751010015601211333311575
Q gi|254780292|r 2 IPTFFQKSSEVEKKWILVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINASKVAFSGKKYDQKTYYRHTGY 81 (155)
Q Consensus 2 ~kT~~~k~~~~~r~W~iiDA~~~~lGRlAs~iA~~L~GKhKp~y~P~~d~GD~VvViNa~ki~~tG~K~~~k~y~~htgy 81 (155)
|+||++ ++++|.||+|||++|+|||||+.||.+|+|||||+|||++|||||||||||++|.+|
T Consensus 1 Mkt~~~--~~~~r~W~iiDA~~q~lGrlA~~ia~~L~GKhKp~y~P~~d~GD~VVViNa~~i~~t--------------- 63 (111)
T 2j01_N 1 MKTYVP--KQVEPRWVLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVT--------------- 63 (111)
T ss_dssp CCCCCC--CCCCCCCCEECCTTSBTTHHHHHHHHHHTTSSSSSCCTTTCCCCCCEECSCSCCBCS---------------
T ss_pred CCCCCC--CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHCEEECCCCCCEEEEEEHHHEEEC---------------
T ss_conf 986575--535530899969999558889999999846431103113578737999500445742---------------
Q ss_pred CCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCEEEEH
Q ss_conf 576336302000012487999999997308998547899962701078999713208547616
Q gi|254780292|r 82 PGGIKKTTAKEILAGASPTNILKKAIARMLPRGPLARKQMKNLHIYAEDHHPHEAQKPVFMDI 144 (155)
Q Consensus 82 pGG~k~~~~~~~~~~~~P~~il~~aV~gMLPkn~lgr~~lkrL~vy~g~~Hph~aq~P~~l~~ 144 (155)
|.|++|++++|+||||||.+|+++|+||+||+|.+|||++|+++.++|
T Consensus 64 ---------------R~P~~I~~r~VRGMLPK~~~G~~alkrLkvy~G~P~~~~~~~~~~ipi 111 (111)
T 2j01_N 64 ---------------THPERVLEHAVKGMLPKGPLGRRLFKRLKVYAGPDHPHQAQRPEKLEV 111 (111)
T ss_dssp ---------------SSCSHHHHHHHHTTSCSSHHHHHHHTTCEECSSSCCTTCSCCCCCC--
T ss_pred ---------------CCHHHHHHHHHHHHCCCCHHHHHHHHCCEEECCCCCCCCCCCCEEECC
T ss_conf ---------------486899999999618997569999848789698999855689867169