HHsearch results for GI: 254780292 and protein with PDBid: 2ftc_H

>2ftc_H L13MT, MRP-L13, 39S ribosomal protein L13, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal RNA; 12.10A {Bos taurus}
Probab=100.00  E-value=0  Score=377.45  Aligned_cols=144  Identities=37%  Similarity=0.676  Sum_probs=139.1

Q ss_pred             CEEEECCHH---HCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHC
Q ss_conf             511326843---60200699978987457679999999846565210345566888999751010015601211333311
Q gi|254780292|r    2 IPTFFQKSS---EVEKKWILVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINASKVAFSGKKYDQKTYYRH   78 (155)
Q Consensus         2 ~kT~~~k~~---~~~r~W~iiDA~~~~lGRlAs~iA~~L~GKhKp~y~P~~d~GD~VvViNa~ki~~tG~K~~~k~y~~h   78 (155)
                      |+||+.++.   +++|+||||||+|++||||||.||++|+|||||+|+|++||||+||||||++|++||+||.+|.|++|
T Consensus         1 m~~~~~~~q~~~~~~r~W~viDA~~~~lGRLAs~VAk~L~GK~kp~y~p~~d~Gd~VvViNa~ki~~tG~k~~~k~y~~h   80 (148)
T 2ftc_H            1 MSSFSRAPQQWATFARIWYLLDGKMQPPGKLAAMASIRLQGLHKPVYHALSDCGDHVVIMNTRHIAFSGNKWEQKVYSSH   80 (148)
T ss_pred             CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEECCCHHHHEEEEEE
T ss_conf             97634575533321417999948999268889999999835876535546567868999735128972621220466775


Q ss_pred             CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCEEEEHHH
Q ss_conf             57557633630200001248799999999730899854789996270107899971320854761665
Q gi|254780292|r   79 TGYPGGIKKTTAKEILAGASPTNILKKAIARMLPRGPLARKQMKNLHIYAEDHHPHEAQKPVFMDIAK  146 (155)
Q Consensus        79 tgypGG~k~~~~~~~~~~~~P~~il~~aV~gMLPkn~lgr~~lkrL~vy~g~~Hph~aq~P~~l~~~~  146 (155)
                      ||||||+++.+++++. .++|++||++||+||||+|++|+.+|+||+||+|++|||++|+|+.+++.+
T Consensus        81 tg~pgg~k~~~~~~~~-~r~P~~il~raVrgMLPkn~~gr~~lkrLkvy~g~~hP~~~q~p~~~~i~q  147 (148)
T 2ftc_H           81 TGYPGGFRQVTAAQLH-LRDPVAIVKLAIYGMLPKNLHRRTMMERLHLFPDEYIPEDILKNLVEELPQ  147 (148)
T ss_pred             EEECCCCCCCCCCHHC-CCCHHHHHHHHHHHHCCCCHHHHHHHHCCEECCCCCCCHHHHCCCCCCCCC
T ss_conf             3216862124520001-357689999999984899811999985857768999986774855346799