HHsearch results for GI: 254780292 and protein with PDBid: 2ftc_H
>2ftc_H L13MT, MRP-L13, 39S ribosomal protein L13, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal RNA; 12.10A {Bos taurus}
Probab=100.00 E-value=0 Score=377.45 Aligned_cols=144 Identities=37% Similarity=0.676 Sum_probs=139.1
Q ss_pred CEEEECCHH---HCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHC
Q ss_conf 511326843---60200699978987457679999999846565210345566888999751010015601211333311
Q gi|254780292|r 2 IPTFFQKSS---EVEKKWILVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINASKVAFSGKKYDQKTYYRH 78 (155)
Q Consensus 2 ~kT~~~k~~---~~~r~W~iiDA~~~~lGRlAs~iA~~L~GKhKp~y~P~~d~GD~VvViNa~ki~~tG~K~~~k~y~~h 78 (155)
|+||+.++. +++|+||||||+|++||||||.||++|+|||||+|+|++||||+||||||++|++||+||.+|.|++|
T Consensus 1 m~~~~~~~q~~~~~~r~W~viDA~~~~lGRLAs~VAk~L~GK~kp~y~p~~d~Gd~VvViNa~ki~~tG~k~~~k~y~~h 80 (148)
T 2ftc_H 1 MSSFSRAPQQWATFARIWYLLDGKMQPPGKLAAMASIRLQGLHKPVYHALSDCGDHVVIMNTRHIAFSGNKWEQKVYSSH 80 (148)
T ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEECCCHHHHEEEEEE
T ss_conf 97634575533321417999948999268889999999835876535546567868999735128972621220466775
Q ss_pred CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCEEEEHHH
Q ss_conf 57557633630200001248799999999730899854789996270107899971320854761665
Q gi|254780292|r 79 TGYPGGIKKTTAKEILAGASPTNILKKAIARMLPRGPLARKQMKNLHIYAEDHHPHEAQKPVFMDIAK 146 (155)
Q Consensus 79 tgypGG~k~~~~~~~~~~~~P~~il~~aV~gMLPkn~lgr~~lkrL~vy~g~~Hph~aq~P~~l~~~~ 146 (155)
||||||+++.+++++. .++|++||++||+||||+|++|+.+|+||+||+|++|||++|+|+.+++.+
T Consensus 81 tg~pgg~k~~~~~~~~-~r~P~~il~raVrgMLPkn~~gr~~lkrLkvy~g~~hP~~~q~p~~~~i~q 147 (148)
T 2ftc_H 81 TGYPGGFRQVTAAQLH-LRDPVAIVKLAIYGMLPKNLHRRTMMERLHLFPDEYIPEDILKNLVEELPQ 147 (148)
T ss_pred EEECCCCCCCCCCHHC-CCCHHHHHHHHHHHHCCCCHHHHHHHHCCEECCCCCCCHHHHCCCCCCCCC
T ss_conf 3216862124520001-357689999999984899811999985857768999986774855346799