HHsearch results for GI: 254780292 and protein with PDBid: 2zjr_G
>2zjr_G 50S ribosomal protein L13; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: c.21.1.1 PDB: 1nwx_H* 1nwy_H* 1sm1_H* 1xbp_H* 2zjp_G* 2zjq_G 1nkw_H 3cf5_G* 3dll_G* 1pnu_H 1pny_H 1vor_K 1vou_K 1vow_K 1voy_K 1vp0_K
Probab=100.00 E-value=0 Score=383.31 Aligned_cols=147 Identities=44% Similarity=0.792 Sum_probs=142.0
Q ss_pred CCEEEECCHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 95113268436020069997898745767999999984656521034556688899975101001560121133331157
Q gi|254780292|r 1 MIPTFFQKSSEVEKKWILVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINASKVAFSGKKYDQKTYYRHTG 80 (155)
Q Consensus 1 ~~kT~~~k~~~~~r~W~iiDA~~~~lGRlAs~iA~~L~GKhKp~y~P~~d~GD~VvViNa~ki~~tG~K~~~k~y~~htg 80 (155)
.||||+|+ +++|+||||||+||+||||||.||++|+|||||+|+|++||||+||||||+++.+||+||.+|.|++|||
T Consensus 28 ~~kt~~pk--~~~r~W~vIDA~g~~LGRLAS~VAk~L~GK~Kp~y~p~~d~GD~ViViNa~ki~~tG~k~~~K~y~~htg 105 (174)
T 2zjr_G 28 KVKTYIPK--NDEQNWVVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDKVYTRYTG 105 (174)
T ss_dssp --CCCCCC--CSCCCEEEEECTTSBHHHHHHHHHHHHHCSSCSSCCSSSCCCCEEEEECCTTCBCSSCSSSSCEEEECCS
T ss_pred EEEEECCC--CCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEECCEEEEECCCCEEEEEEEEEEC
T ss_conf 45785478--7766689996999946888999999984588750556856676699961417898265200036888703
Q ss_pred CCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCEEEEHHHCCCC
Q ss_conf 5576336302000012487999999997308998547899962701078999713208547616652813
Q gi|254780292|r 81 YPGGIKKTTAKEILAGASPTNILKKAIARMLPRGPLARKQMKNLHIYAEDHHPHEAQKPVFMDIAKMNPK 150 (155)
Q Consensus 81 ypGG~k~~~~~~~~~~~~P~~il~~aV~gMLPkn~lgr~~lkrL~vy~g~~Hph~aq~P~~l~~~~~~~k 150 (155)
||||++++++.+++ +++|++||++||+||||+|++|+.+|+||+||+|++|||++|+|+.|+++.+|.|
T Consensus 106 ~pGg~k~~~~~~~~-~r~P~~Il~rAVrGMLPKn~lgr~~lkrLkVy~G~~HPh~aq~P~~l~~~~~~~k 174 (174)
T 2zjr_G 106 YQGGLKTETAREAL-SKHPERVIEHAVFGMLPKGRQGRAMHTRLKVYAGETHPHSAQKPQVLKTQPLEVK 174 (174)
T ss_dssp SCSSCCEEEESTTT-TSCHHHHHHHHHGGGSCCSHHHHHHHTTCEECSCSTGGGGSCCSCCCCCCCC---
T ss_pred CCCCCCCCCCCHHH-HCCHHHHHHHHHHHCCCCCHHHHHHHHCCEEECCCCCCHHHCCCCEECCCCCCCC
T ss_conf 36886434321434-2173678999998718998659999848878589999932139836424357779