HHsearch results for GI: 254780292 and protein with PDBid: 2zjr_G

>2zjr_G 50S ribosomal protein L13; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: c.21.1.1 PDB: 1nwx_H* 1nwy_H* 1sm1_H* 1xbp_H* 2zjp_G* 2zjq_G 1nkw_H 3cf5_G* 3dll_G* 1pnu_H 1pny_H 1vor_K 1vou_K 1vow_K 1voy_K 1vp0_K
Probab=100.00  E-value=0  Score=383.31  Aligned_cols=147  Identities=44%  Similarity=0.792  Sum_probs=142.0

Q ss_pred             CCEEEECCHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCC
Q ss_conf             95113268436020069997898745767999999984656521034556688899975101001560121133331157
Q gi|254780292|r    1 MIPTFFQKSSEVEKKWILVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINASKVAFSGKKYDQKTYYRHTG   80 (155)
Q Consensus         1 ~~kT~~~k~~~~~r~W~iiDA~~~~lGRlAs~iA~~L~GKhKp~y~P~~d~GD~VvViNa~ki~~tG~K~~~k~y~~htg   80 (155)
                      .||||+|+  +++|+||||||+||+||||||.||++|+|||||+|+|++||||+||||||+++.+||+||.+|.|++|||
T Consensus        28 ~~kt~~pk--~~~r~W~vIDA~g~~LGRLAS~VAk~L~GK~Kp~y~p~~d~GD~ViViNa~ki~~tG~k~~~K~y~~htg  105 (174)
T 2zjr_G           28 KVKTYIPK--NDEQNWVVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDKVYTRYTG  105 (174)
T ss_dssp             --CCCCCC--CSCCCEEEEECTTSBHHHHHHHHHHHHHCSSCSSCCSSSCCCCEEEEECCTTCBCSSCSSSSCEEEECCS
T ss_pred             EEEEECCC--CCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEECCEEEEECCCCEEEEEEEEEEC
T ss_conf             45785478--7766689996999946888999999984588750556856676699961417898265200036888703


Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCEEEEHHHCCCC
Q ss_conf             5576336302000012487999999997308998547899962701078999713208547616652813
Q gi|254780292|r   81 YPGGIKKTTAKEILAGASPTNILKKAIARMLPRGPLARKQMKNLHIYAEDHHPHEAQKPVFMDIAKMNPK  150 (155)
Q Consensus        81 ypGG~k~~~~~~~~~~~~P~~il~~aV~gMLPkn~lgr~~lkrL~vy~g~~Hph~aq~P~~l~~~~~~~k  150 (155)
                      ||||++++++.+++ +++|++||++||+||||+|++|+.+|+||+||+|++|||++|+|+.|+++.+|.|
T Consensus       106 ~pGg~k~~~~~~~~-~r~P~~Il~rAVrGMLPKn~lgr~~lkrLkVy~G~~HPh~aq~P~~l~~~~~~~k  174 (174)
T 2zjr_G          106 YQGGLKTETAREAL-SKHPERVIEHAVFGMLPKGRQGRAMHTRLKVYAGETHPHSAQKPQVLKTQPLEVK  174 (174)
T ss_dssp             SCSSCCEEEESTTT-TSCHHHHHHHHHGGGSCCSHHHHHHHTTCEECSCSTGGGGSCCSCCCCCCCC---
T ss_pred             CCCCCCCCCCCHHH-HCCHHHHHHHHHHHCCCCCHHHHHHHHCCEEECCCCCCHHHCCCCEECCCCCCCC
T ss_conf             36886434321434-2173678999998718998659999848878589999932139836424357779