HHsearch results for GI: 254780292 and protein with PDBid: 3jyw_M
>3jyw_M 60S ribosomal protein L16(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_M
Probab=100.00 E-value=6.9e-43 Score=271.13 Aligned_cols=116 Identities=25% Similarity=0.404 Sum_probs=109.6
Q ss_pred EEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCC
Q ss_conf 99978987457679999999846565210345566888999751010015601211333311575576336302000012
Q gi|254780292|r 17 ILVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINASKVAFSGKKYDQKTYYRHTGYPGGIKKTTAKEILAG 96 (155)
Q Consensus 17 ~iiDA~~~~lGRlAs~iA~~L~GKhKp~y~P~~d~GD~VvViNa~ki~~tG~K~~~k~y~~htgypGG~k~~~~~~~~~~ 96 (155)
.||||+|++||||||.||++|+ +||+|||||||+|.+||+||.+|.||+|||||||++..++..++ +
T Consensus 1 IVIDA~g~iLGRLAS~VAk~Ll------------~Gd~VVVVNAeki~iTG~K~~~k~yy~~~g~~gg~k~~~~g~~~-~ 67 (178)
T 3jyw_M 1 VVIDGKGHLVGRLASVVAKQLL------------NGQKIVVVRAEELNISGEFFRNKLKYHDFLRKATAFNKTRGPFH-F 67 (178)
T ss_dssp CCCCCCSSCSHHHHHHHHHHHT------------TTCCCCEECSTTSCCCCCSSHHHHSCSSSSSSTTSCCCSSSCCC-C
T ss_pred CEEECCCCCHHHHHHHHHHHHC------------CCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHH-C
T ss_conf 9895899966888999999972------------89979999711079747401468999842015664685778873-4
Q ss_pred CCHHHHHHHHHHHCCC-CCHHHHHHHHCCCCCCCCCCCHHHCCCEEEEHH
Q ss_conf 4879999999973089-985478999627010789997132085476166
Q gi|254780292|r 97 ASPTNILKKAIARMLP-RGPLARKQMKNLHIYAEDHHPHEAQKPVFMDIA 145 (155)
Q Consensus 97 ~~P~~il~~aV~gMLP-kn~lgr~~lkrL~vy~g~~Hph~aq~P~~l~~~ 145 (155)
++|++||+++|+|||| ||++|+.+|+||+||+|.+|||++|+|+.++-.
T Consensus 68 r~P~~Il~rAVrGMLP~K~~~Gr~alkrLkVY~G~php~~~qk~~~i~~A 117 (178)
T 3jyw_M 68 RAPSRIFYKALRGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQA 117 (178)
T ss_dssp SSTTTHHHHHTTSSSCSSSHHHHHHHHHCCEESSCCCCSCCSCSSSCCSS
T ss_pred CCHHHHHHHHHHCCCCCCCHHHHHHHHCCEEECCCCCCHHCCCCEECCHH
T ss_conf 37589999998456899993699998387897899997211788726447