RPSBLAST alignment of GI: 254780292 and protein with PDBid: 1j3a

>1j3a_A 50S ribosomal protein L13P; rRNA binding, ribosomal assembly, ribosome; 1.60A {Pyrococcus horikoshii} SCOP: c.21.1.1 Length = 142
 Score =  119 bits (300), Expect = 2e-28
 Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 14/138 (10%)

Query: 18  LVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINASKVAFSGKKYDQKTYYR 77
           +++A GLI+GRLAS++A  L             +G+ VVI+NA K   +G +    + Y+
Sbjct: 3   IINADGLILGRLASRVAKML------------LEGEEVVIVNAEKAVITGNREVIFSKYK 50

Query: 78  HTGYPGGIKKTTAKEILAGASPTNILKKAIARMLP-RGPLARKQMKNLHIYAEDHHPHEA 136
                  +                I+++ I  MLP +    RK  + L +Y       + 
Sbjct: 51  QRTGLRTLTNPRRGPFYPK-RSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQD 109

Query: 137 QKPVFMDIAKMNPKNSRR 154
           ++   +  A ++  +  +
Sbjct: 110 KQLETIVEAHVSRLSRPK 127