RPSBLAST alignment of GI: 254780292 and protein with PDBid: 1j3a
>1j3a_A 50S ribosomal protein L13P; rRNA binding, ribosomal assembly, ribosome; 1.60A {Pyrococcus horikoshii} SCOP: c.21.1.1 Length = 142
Score = 119 bits (300), Expect = 2e-28
Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 14/138 (10%)
Query: 18 LVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINASKVAFSGKKYDQKTYYR 77
+++A GLI+GRLAS++A L +G+ VVI+NA K +G + + Y+
Sbjct: 3 IINADGLILGRLASRVAKML------------LEGEEVVIVNAEKAVITGNREVIFSKYK 50
Query: 78 HTGYPGGIKKTTAKEILAGASPTNILKKAIARMLP-RGPLARKQMKNLHIYAEDHHPHEA 136
+ I+++ I MLP + RK + L +Y +
Sbjct: 51 QRTGLRTLTNPRRGPFYPK-RSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQD 109
Query: 137 QKPVFMDIAKMNPKNSRR 154
++ + A ++ + +
Sbjct: 110 KQLETIVEAHVSRLSRPK 127