RPSBLAST alignment of GI: 254780292 and SCOP domain: d1j3aa_

Alignment

 Score = 98.9 bits (246), Expect = 2e-22
 Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 14/138 (10%)

Query: 18  LVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINASKVAFSGKKYDQKTYYR 77
           +++A GLI+GRLAS++A  L             +G+ VVI+NA K   +G +    + Y+
Sbjct: 3   IINADGLILGRLASRVAKML------------LEGEEVVIVNAEKAVITGNREVIFSKYK 50

Query: 78  HTGYPGGIKKTTAKEILAGASPTNILKKAIARMLP-RGPLARKQMKNLHIYAEDHHPHEA 136
                  +                I+++ I  MLP +    RK  + L +Y       + 
Sbjct: 51  QRTGLRTLTNPRRGPFYPK-RSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQD 109

Query: 137 QKPVFMDIAKMNPKNSRR 154
           ++   +  A ++  +  +
Sbjct: 110 KQLETIVEAHVSRLSRPK 127

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribosomal protein L13
superfamily: Ribosomal protein L13
family: Ribosomal protein L13
domain: Ribosomal protein L13
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]