HHsearch alignment for GI: 254780293 and conserved domain: PRK00474
>PRK00474 rps9p 30S ribosomal protein S9P; Reviewed.
Probab=100.00 E-value=0 Score=325.68 Aligned_cols=125 Identities=35% Similarity=0.461 Sum_probs=118.2
Q ss_pred CCEEEEECCCEEEEEEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHC-CCCCEEEEEEEECCCCCHHHHHHHHHH
Q ss_conf 5001311121089999981897399941008884469899999999998738-566410799982598301888999999
Q gi|254780293|r 45 RSYATGKRKTSIARVWIKSGSGKFTINYVDISKYFTQDLLVLNIKRPFNTVS-QDNMYDVFATVSGGGLSGQASAICHGV 123 (170)
Q Consensus 45 ~~~~tGrRKtsvArV~l~~GsG~I~INgk~~~~Yf~~~~~r~~i~~Pl~~~~-~~~~~Di~~~V~GGG~sgQa~AirlaI 123 (170)
T Consensus 3 ~i~atGrRKtaiArv~l~~G~G~i~INgk~~~~y-~~~~~~~~i~~Pl~~~~~~~~~~Di~i~V~GGG~sgQA~AirlaI 81 (132)
T PRK00474 3 VVITSGKRKTAIARATIKEGKGRVRINGVPLELY-EPELARMKIMEPLILAGDIASKVDIDVDVSGGGIMGQADAVRTAI 81 (132)
T ss_pred EEEEECCCCCEEEEEEEECCCCEEEECCEEHHHH-CCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 5887678766799999982873598898758996-899999999855999850034631799997787259999999999
Q ss_pred HHHHHHH--CHHHHHHHHH--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999765--7634487997--798335755416759528984335430579
Q gi|254780293|r 124 AKALTYF--QPDLRPQIKK--GGFLTRDSRIVERKKYGKAKARRSFQFSKR 170 (170)
Q Consensus 124 arAL~~~--~p~~r~~Lk~--~glLt~D~R~~ErKK~G~~kARk~~q~skR 170 (170)
T Consensus 82 aRAL~~~~~~~~~~~~~~~~d~glLtrD~R~~ERKK~G~~kARk~~Q~SkR 132 (132)
T PRK00474 82 ARGLVEWTGDMELKDAFLEYDRTLLVGDPRRTEPKKPGGKGARAKRQKSYR 132 (132)
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 999998624877899998533786214635433577898554435255569