HHsearch alignment for GI: 254780293 and conserved domain: TIGR02903
>TIGR02903 spore_lon_C ATP-dependent protease, Lon family; InterPro: IPR014252 This entry shows some relation to the widely distributed ATP-dependent protease La, also called Lon or LonA (IPR004815 from INTERPRO), but is more closely related to LonB (IPR014251 from INTERPRO), a LonA paralog found only in endospore-forming bacteria. Proteins in this entry are unassigned peptidases belonging to the MEROPS peptidase family S16 (lon protease family, clan SJ). They are restricted to a subset of endospore-forming species, and probably participate in the program of endospore formation. We propose the designation LonC..
Probab=93.88 E-value=0.099 Score=31.04 Aligned_cols=84 Identities=21% Similarity=0.238 Sum_probs=50.2
Q ss_pred CCCCCEEEEE------CCCEEEEEEE--ECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHCCC-CCEEEEEEEECCC-
Q ss_conf 4355001311------1210899999--8189739994100888446989999999999873856-6410799982598-
Q gi|254780293|r 42 QWQRSYATGK------RKTSIARVWI--KSGSGKFTINYVDISKYFTQDLLVLNIKRPFNTVSQD-NMYDVFATVSGGG- 111 (170)
Q Consensus 42 ~~g~~~~tGr------RKtsvArV~l--~~GsG~I~INgk~~~~Yf~~~~~r~~i~~Pl~~~~~~-~~~Di~~~V~GGG- 111 (170)
T Consensus 446 EvG~vFGLGV~gy~GS~lEIEa~aF~A~~~GkG~~RfNdTAGSM--aKDSvFNAasviRk~T~~D~~~yD~HVNViGGG~ 523 (616)
T TIGR02903 446 EVGHVFGLGVSGYLGSVLEIEAVAFEAKEKGKGTVRFNDTAGSM--AKDSVFNAASVIRKITGKDLKDYDIHVNVIGGGR 523 (616)
T ss_pred CEEEEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCC--HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
T ss_conf 30468704212100233355504423778995058861565530--3577898899986530468341651788852770
Q ss_pred ---CCHHHHHHHHHHHHHHH
Q ss_conf ---30188899999999997
Q gi|254780293|r 112 ---LSGQASAICHGVAKALT 128 (170)
Q Consensus 112 ---~sgQa~AirlaIarAL~ 128 (170)
T Consensus 524 IDGPSA-G~Ai~~~~~SA~~ 542 (616)
T TIGR02903 524 IDGPSA-GAAITLCIISAIL 542 (616)
T ss_pred CCCCCH-HHHHHHHHHHHHC
T ss_conf 175325-7999999999870