HHsearch alignment for GI: 254780293 and conserved domain: pfam00380
>pfam00380 Ribosomal_S9 Ribosomal protein S9/S16. This family includes small ribosomal subunit S9 from prokaryotes and S16 from eukaryotes.
Probab=100.00 E-value=0 Score=339.54 Aligned_cols=121 Identities=51% Similarity=0.849 Sum_probs=120.2
Q ss_pred EECCCEEEEEEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 11121089999981897399941008884469899999999998738566410799982598301888999999999976
Q gi|254780293|r 50 GKRKTSIARVWIKSGSGKFTINYVDISKYFTQDLLVLNIKRPFNTVSQDNMYDVFATVSGGGLSGQASAICHGVAKALTY 129 (170)
Q Consensus 50 GrRKtsvArV~l~~GsG~I~INgk~~~~Yf~~~~~r~~i~~Pl~~~~~~~~~Di~~~V~GGG~sgQa~AirlaIarAL~~ 129 (170)
T Consensus 1 GrRKtaiArv~l~~G~G~i~INg~~~~~yf~~~~~r~~v~~Pl~~~~~~~~~Di~i~V~GGG~sgQa~AirlaIaRaLv~ 80 (121)
T pfam00380 1 GRRKTAVARVWLKPGSGKITINGKPLEEYFPNETLRMKILEPLELTGTLGKFDIVVTVKGGGISGQAGAIRLAIARALVA 80 (121)
T ss_pred CCCCCEEEEEEEEECCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 99845899999980776799989328886698999999997999860046642699996888858999999999999999
Q ss_pred HCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 57634487997798335755416759528984335430579
Q gi|254780293|r 130 FQPDLRPQIKKGGFLTRDSRIVERKKYGKAKARRSFQFSKR 170 (170)
Q Consensus 130 ~~p~~r~~Lk~~glLt~D~R~~ErKK~G~~kARk~~q~skR 170 (170)
T Consensus 81 ~~~~~r~~Lk~~glLt~D~R~~ErKK~G~~kARk~~q~skR 121 (121)
T pfam00380 81 YDPELRPELKKAGLLTRDPRRKERKKYGLKKARKRPQFSKR 121 (121)
T ss_pred HCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 79787899998869015751115586897566746355679